utils/debian/debian/jalview-mime.xml

   1 <?xml version="1.0" encoding="UTF-8"?>
   2 <mime-info xmlns="http://www.freedesktop.org/standards/shared-mime-info">
   3
   4   <mime-type type="application/x-jalview+xml+zip">
   5     <comment>Jalview File</comment>
   6     <generic-icon name="x-jalview-file"/>
   7     <glob pattern="*.jvp" weight="100"/>
   8   </mime-type>
   9
  10   <mime-type type="chemical/x-cif">
  11     <comment>CIF File</comment>
  12     <generic-icon name="x-jalview-file"/>
  13     <glob pattern="*.cif" weight="40"/>
  14   </mime-type>
  15
  16   <mime-type type="chemical/x-mmcif">
  17     <comment>mmCIF File</comment>
  18     <generic-icon name="x-jalview-file"/>
  19     <glob pattern="*.mcif" weight="40"/>
  20     <glob pattern="*.mmcif" weight="40"/>
  21   </mime-type>
  22
  23   <mime-type type="chemical/x-pdb">
  24     <comment>PDB File</comment>
  25     <generic-icon name="x-jalview-file"/>
  26     <glob pattern="*.pdb" weight="40"/>
  27     <glob pattern="*.ent" weight="40"/>
  28   </mime-type>
  29
  30   <mime-type type="application/x-amsa+txt">
  31     <comment>AMSA File</comment>
  32     <generic-icon name="x-jalview-file"/>
  33     <glob pattern="*.amsa" weight="90"/>
  34   </mime-type>
  35
  36   <mime-type type="application/x-jalview-annotations+text">
  37     <comment>Jalview Annotations File</comment>
  38     <generic-icon name="x-jalview-file"/>
  39     <glob pattern="*.annotations" weight="100"/>
  40     <glob pattern="*.jvannotations" weight="100"/>
  41   </mime-type>
  42
  43   <mime-type type="application/x-jalview-biojson+json">
  44     <comment>BioJSON File</comment>
  45     <generic-icon name="x-jalview-file"/>
  46     <glob pattern="*.biojson" weight="100"/>
  47   </mime-type>
  48
  49   <mime-type type="application/x-blc+txt">
  50     <comment>BLC File</comment>
  51     <generic-icon name="x-jalview-file"/>
  52     <glob pattern="*.blc" weight="90"/>
  53   </mime-type>
  54
  55   <mime-type type="application/x-clustal+txt">
  56     <comment>Clustal File</comment>
  57     <generic-icon name="x-jalview-file"/>
  58     <glob pattern="*.aln" weight="90"/>
  59   </mime-type>
  60
  61   <mime-type type="application/x-fasta+txt">
  62     <comment>Fasta File</comment>
  63     <generic-icon name="x-jalview-file"/>
  64     <glob pattern="*.fa" weight="90"/>
  65     <glob pattern="*.fasta" weight="90"/>
  66   </mime-type>
  67
  68   <mime-type type="application/x-jalview-features+text">
  69     <comment>Jalview Features File</comment>
  70     <generic-icon name="x-jalview-file"/>
  71     <glob pattern="*.features" weight="100"/>
  72     <glob pattern="*.jvfeatures" weight="100"/>
  73   </mime-type>
  74
  75   <mime-type type="application/x-gff2+txt">
  76     <comment>Generic Features Format v2 File</comment>
  77     <generic-icon name="x-jalview-file"/>
  78     <glob pattern="*.gff2" weight="90"/>
  79   </mime-type>
  80
  81   <mime-type type="application/x-gff3+txt">
  82     <comment>Generic Features Format v3 File</comment>
  83     <generic-icon name="x-jalview-file"/>
  84     <glob pattern="*.gff3" weight="90"/>
  85   </mime-type>
  86
  87   <mime-type type="application/x-jalview-jnet+text">
  88     <comment>JnetFile File</comment>
  89     <generic-icon name="x-jalview-file"/>
  90     <glob pattern="*.concise" weight="100"/>
  91     <glob pattern="*.jnet" weight="100"/>
  92   </mime-type>
  93
  94   <mime-type type="application/x-msf+txt">
  95     <comment>MSF File</comment>
  96     <generic-icon name="x-jalview-file"/>
  97     <glob pattern="*.msf" weight="90"/>
  98   </mime-type>
  99
 100   <mime-type type="application/x-pfam+txt">
 101     <comment>PFAM File</comment>
 102     <generic-icon name="x-jalview-file"/>
 103     <glob pattern="*.pfam" weight="90"/>
 104   </mime-type>
 105
 106   <mime-type type="application/x-phylip+txt">
 107     <comment>PHYLIP File</comment>
 108     <generic-icon name="x-jalview-file"/>
 109     <glob pattern="*.phy" weight="90"/>
 110   </mime-type>
 111
 112   <mime-type type="application/x-pileup+txt">
 113     <comment>PileUp File</comment>
 114     <generic-icon name="x-jalview-file"/>
 115     <glob pattern="*.pileup" weight="90"/>
 116   </mime-type>
 117
 118   <mime-type type="application/x-pir+txt">
 119     <comment>PIR File</comment>
 120     <generic-icon name="x-jalview-file"/>
 121     <glob pattern="*.pir" weight="90"/>
 122   </mime-type>
 123
 124   <mime-type type="application/rnaml+xml">
 125     <comment>RNAML File</comment>
 126     <generic-icon name="x-jalview-file"/>
 127     <glob pattern="*.rnaml" weight="90"/>
 128   </mime-type>
 129
 130   <mime-type type="application/x-jalview-scorematrix+text">
 131     <comment>Substitution Matrix File</comment>
 132     <generic-icon name="x-jalview-file"/>
 133     <glob pattern="*.mat" weight="100"/>
 134   </mime-type>
 135
 136   <mime-type type="application/x-stockholm+txt">
 137     <comment>Stockholm File</comment>
 138     <generic-icon name="x-jalview-file"/>
 139     <glob pattern="*.sto" weight="90"/>
 140     <glob pattern="*.stk" weight="90"/>
 141   </mime-type>
 142
 143 </mime-info>