JAL-3848 update jalview core with slivka classes, example file import and structure...
[jalview.git] / utils / jalviewjs / classlists / jalview.txt
1 intervalstore/api/IntervalI.js
2 intervalstore/api/IntervalStoreI.js
3 intervalstore/impl/BinarySearcher.js
4 intervalstore/impl/IntervalStore.js
5 intervalstore/impl/NCList.js
6 intervalstore/impl/NCNode.js
7 jalview/analysis/AAFrequency.js
8 jalview/analysis/AlignSeq.js
9 jalview/analysis/AlignmentAnnotationUtils.js
10 jalview/analysis/AlignmentSorter.js
11 jalview/analysis/AlignmentUtils.js
12 jalview/analysis/AnnotationSorter.js
13 jalview/analysis/Conservation.js
14 jalview/analysis/CrossRef.js
15 jalview/analysis/GeneticCodeI.js
16 jalview/analysis/GeneticCodes.js
17 jalview/analysis/SeqsetUtils.js
18 jalview/analysis/SequenceIdMatcher.js
19 jalview/analysis/TreeModel.js
20 jalview/analysis/scoremodels/DistanceScoreModel.js
21 jalview/analysis/scoremodels/FeatureDistanceModel.js
22 jalview/analysis/scoremodels/PIDModel.js
23 jalview/analysis/scoremodels/ScoreMatrix.js
24 jalview/analysis/scoremodels/ScoreModels.js
25 jalview/analysis/scoremodels/SimilarityScoreModel.js
26 jalview/api/AlignCalcManagerI2.js
27 jalview/api/AlignCalcWorkerI.js
28 jalview/api/AlignViewControllerGuiI.js
29 jalview/api/AlignViewControllerI.js
30 jalview/api/AlignViewportI.js
31 jalview/api/AlignmentViewPanel.js
32 jalview/api/BuildDetailsI.js
33 jalview/api/DBRefEntryI.js
34 jalview/api/FeatureColourI.js
35 jalview/api/FeatureRenderer.js
36 jalview/api/FeatureSettingsModelI.js
37 jalview/api/FeaturesDisplayedI.js
38 jalview/api/FeaturesSourceI.js
39 jalview/api/JalviewJSApi.js
40 jalview/api/OOMHandlerI.js
41 jalview/api/PollableAlignCalcWorkerI.js
42 jalview/api/SequenceRenderer.js
43 jalview/api/SequenceStructureBinding.js
44 jalview/api/StructureSelectionManagerProvider.js
45 jalview/api/ViewStyleI.js
46 jalview/api/analysis/PairwiseScoreModelI.js
47 jalview/api/analysis/ScoreModelI.js
48 jalview/api/structures/JalviewStructureDisplayI.js
49 jalview/bin/AppletParams.js
50 jalview/bin/ApplicationSingletonProvider.js
51 jalview/bin/ArgsParser.js
52 jalview/bin/BuildDetails.js
53 jalview/bin/Cache.js
54 jalview/bin/Jalview.js
55 jalview/bin/JalviewJSApp.js
56 jalview/bin/JalviewTaskbar.js
57 jalview/controller/AlignViewController.js
58 jalview/datamodel/ASequence.js
59 jalview/datamodel/ASequenceI.js
60 jalview/datamodel/Alignment.js
61 jalview/datamodel/AlignmentAnnotation.js
62 jalview/datamodel/AlignmentI.js
63 jalview/datamodel/AlignmentOrder.js
64 jalview/datamodel/AlignmentView.js
65 jalview/datamodel/AnnotatedCollectionI.js
66 jalview/datamodel/Annotation.js
67 jalview/datamodel/BinaryNode.js
68 jalview/datamodel/CigarArray.js
69 jalview/datamodel/CigarBase.js
70 jalview/datamodel/CigarSimple.js
71 jalview/datamodel/ColumnSelection.js
72 jalview/datamodel/ContiguousI.js
73 jalview/datamodel/DBRefEntry.js
74 jalview/datamodel/DBRefSource.js
75 jalview/datamodel/GraphLine.js
76 jalview/datamodel/HiddenColumns.js
77 jalview/datamodel/HiddenColumnsCursor.js
78 jalview/datamodel/HiddenCursorPosition.js
79 jalview/datamodel/HiddenSequences.js
80 jalview/datamodel/Mapping.js
81 jalview/datamodel/PDBEntry.js
82 jalview/datamodel/Profile.js
83 jalview/datamodel/ProfileI.js
84 jalview/datamodel/Profiles.js
85 jalview/datamodel/ProfilesI.js
86 jalview/datamodel/Range.js
87 jalview/datamodel/RangeIterator.js
88 jalview/datamodel/ResidueCount.js
89 jalview/datamodel/SearchResultMatchI.js
90 jalview/datamodel/SearchResults.js
91 jalview/datamodel/SearchResultsI.js
92 jalview/datamodel/SeqCigar.js
93 jalview/datamodel/Sequence.js
94 jalview/datamodel/SequenceCollectionI.js
95 jalview/datamodel/SequenceCursor.js
96 jalview/datamodel/SequenceFeature.js
97 jalview/datamodel/SequenceGroup.js
98 jalview/datamodel/SequenceI.js
99 jalview/datamodel/SequenceNode.js
100 jalview/datamodel/StructureViewerModel.js
101 jalview/datamodel/features/FeatureAttributes.js
102 jalview/datamodel/features/FeatureLocationI.js
103 jalview/datamodel/features/FeatureStore.js
104 jalview/datamodel/features/SequenceFeatures.js
105 jalview/datamodel/features/SequenceFeaturesI.js
106 jalview/ext/ensembl/EnsemblData.js
107 jalview/ext/ensembl/EnsemblGene.js
108 jalview/ext/ensembl/EnsemblRestClient.js
109 jalview/ext/ensembl/EnsemblSeqProxy.js
110 jalview/ext/ensembl/EnsemblSequenceFetcher.js
111 jalview/fts/api/FTSData.js
112 jalview/fts/api/FTSDataColumnI.js
113 jalview/fts/api/FTSRestClientI.js
114 jalview/fts/core/DecimalFormatTableCellRenderer.js
115 jalview/fts/core/FTSDataColumnPreferences.js
116 jalview/fts/core/FTSRestClient.js
117 jalview/fts/core/FTSRestRequest.js
118 jalview/fts/core/FTSRestResponse.js
119 jalview/fts/service/pdb/PDBFTSRestClient.js
120 jalview/gui/APQHandlers.js
121 jalview/gui/AlignFrame.js
122 jalview/gui/AlignViewport.js
123 jalview/gui/AlignmentPanel.js
124 jalview/gui/AnnotationColumnChooser.js
125 jalview/gui/AnnotationLabels.js
126 jalview/gui/AnnotationPanel.js
127 jalview/gui/AnnotationRowFilter.js
128 jalview/gui/ColourMenuHelper.js
129 jalview/gui/ComboBoxTooltipRenderer.js
130 jalview/gui/Desktop.js
131 jalview/gui/FeatureRenderer.js
132 jalview/gui/IProgressIndicator.js
133 jalview/gui/IProgressIndicatorHandler.js
134 jalview/gui/IdCanvas.js
135 jalview/gui/IdPanel.js
136 jalview/gui/IdwidthAdjuster.js
137 jalview/gui/JalviewBooleanRadioButtons.js
138 jalview/gui/JalviewChangeSupport.js
139 jalview/gui/JvOptionPane.js
140 jalview/gui/JvSwingUtils.js
141 jalview/gui/OptsAndParamsPage.js
142 jalview/gui/OptsParametersContainerI.js
143 jalview/gui/PaintRefresher.js
144 jalview/gui/PopupMenu.js
145 jalview/gui/Preferences.js
146 jalview/gui/ProgressBar.js
147 jalview/gui/ScalePanel.js
148 jalview/gui/SeqCanvas.js
149 jalview/gui/SeqPanel.js
150 jalview/gui/SequenceFetcher.js
151 jalview/gui/SequenceRenderer.js
152 jalview/gui/SliderPanel.js
153 jalview/gui/SlivkaPreferences.js
154 jalview/gui/StructureChooser.js
155 jalview/gui/StructureViewer.js
156 jalview/gui/TreeCanvas.js
157 jalview/gui/TreePanel.js
158 jalview/gui/ViewSelectionMenu.js
159 jalview/gui/WebserviceInfo.js
160 jalview/gui/WsJobParameters.js
161 jalview/gui/WsParamSetManager.js
162 jalview/hmmer/HmmerCommand.js
163 jalview/io/AlignFile.js
164 jalview/io/AlignmentFileReaderI.js
165 jalview/io/AlignmentFileWriterI.js
166 jalview/io/AnnotationFile.js
167 jalview/io/AppletFormatAdapter.js
168 jalview/io/BackupFilenameParts.js
169 jalview/io/BackupFiles.js
170 jalview/io/BackupFilesPresetEntry.js
171 jalview/io/DataSourceType.js
172 jalview/io/FastaFile.js
173 jalview/io/FeaturesFile.js
174 jalview/io/FileFormat.js
175 jalview/io/FileFormatI.js
176 jalview/io/FileFormats.js
177 jalview/io/FileLoader.js
178 jalview/io/FileParse.js
179 jalview/io/FormatAdapter.js
180 jalview/io/IdentifyFile.js
181 jalview/io/IntKeyStringValueEntry.js
182 jalview/io/JalviewFileChooser.js
183 jalview/io/JalviewFileFilter.js
184 jalview/io/JalviewFileView.js
185 jalview/io/NewickFile.js
186 jalview/io/PIRFile.js
187 jalview/io/ScoreMatrixFile.js
188 jalview/io/SequenceAnnotationReport.js
189 jalview/io/StockholmFile.js
190 jalview/io/cache/JvCacheableInputBox.js
191 jalview/javascript/json/JSON.js
192 jalview/javascript/log4j/ConsoleAppender.js
193 jalview/javascript/log4j/Layout.js
194 jalview/javascript/log4j/Level.js
195 jalview/javascript/log4j/Logger.js
196 jalview/javascript/log4j/Priority.js
197 jalview/javascript/log4j/SimpleLayout.js
198 jalview/javascript/log4j/spi/OptionHandler.js
199 jalview/javascript/web/Client.js
200 jalview/javascript/web/ClientResponse.js
201 jalview/javascript/web/WebResource.js
202 jalview/jbgui/GAlignFrame.js
203 jalview/jbgui/GAlignmentPanel.js
204 jalview/jbgui/GDesktop.js
205 jalview/jbgui/GPreferences.js
206 jalview/jbgui/GSliderPanel.js
207 jalview/jbgui/GStructureChooser.js
208 jalview/jbgui/GTreePanel.js
209 jalview/jbgui/GWebserviceInfo.js
210 jalview/project/Jalview2XML.js
211 jalview/renderer/AnnotationRenderer.js
212 jalview/renderer/AwtRenderPanelI.js
213 jalview/renderer/OverviewResColourFinder.js
214 jalview/renderer/ResidueColourFinder.js
215 jalview/renderer/ResidueShader.js
216 jalview/renderer/ResidueShaderI.js
217 jalview/renderer/ScaleRenderer.js
218 jalview/renderer/seqfeatures/FeatureRenderer.js
219 jalview/schemes/Blosum62ColourScheme.js
220 jalview/schemes/BuriedColourScheme.js
221 jalview/schemes/ClustalxColourScheme.js
222 jalview/schemes/ColourSchemeI.js
223 jalview/schemes/ColourSchemeProperty.js
224 jalview/schemes/ColourSchemes.js
225 jalview/schemes/Consensus.js
226 jalview/schemes/FeatureColour.js
227 jalview/schemes/FeatureSettingsAdapter.js
228 jalview/schemes/HMMMatchScoreColourScheme.js
229 jalview/schemes/HelixColourScheme.js
230 jalview/schemes/HmmerColourScheme.js
231 jalview/schemes/HmmerGlobalBackground.js
232 jalview/schemes/HmmerLocalBackground.js
233 jalview/schemes/HydrophobicColourScheme.js
234 jalview/schemes/IdColourScheme.js
235 jalview/schemes/JalviewColourScheme.js
236 jalview/schemes/NucleotideColourScheme.js
237 jalview/schemes/PIDColourScheme.js
238 jalview/schemes/PurinePyrimidineColourScheme.js
239 jalview/schemes/RNAHelicesColour.js
240 jalview/schemes/ResidueColourScheme.js
241 jalview/schemes/ResidueProperties.js
242 jalview/schemes/ScoreColourScheme.js
243 jalview/schemes/StrandColourScheme.js
244 jalview/schemes/TCoffeeColourScheme.js
245 jalview/schemes/TaylorColourScheme.js
246 jalview/schemes/TurnColourScheme.js
247 jalview/schemes/ZappoColourScheme.js
248 jalview/structure/AtomSpec.js
249 jalview/structure/CommandListener.js
250 jalview/structure/SelectionListener.js
251 jalview/structure/SelectionSource.js
252 jalview/structure/SequenceListener.js
253 jalview/structure/StructureImportSettings.js
254 jalview/structure/StructureSelectionManager.js
255 jalview/structure/VamsasSource.js
256 jalview/urls/CustomUrlProvider.js
257 jalview/urls/IdOrgSettings.js
258 jalview/urls/IdentifiersUrlProvider.js
259 jalview/urls/UrlLinkDisplay.js
260 jalview/urls/UrlLinkTableModel.js
261 jalview/urls/UrlProvider.js
262 jalview/urls/UrlProviderImpl.js
263 jalview/urls/api/UrlProviderFactoryI.js
264 jalview/urls/api/UrlProviderI.js
265 jalview/urls/desktop/DesktopUrlProviderFactory.js
266 jalview/util/BrowserLauncher.js
267 jalview/util/ColorUtils.js
268 jalview/util/Comparison.js
269 jalview/util/DBRefUtils.js
270 jalview/util/FileUtils.js
271 jalview/util/Format.js
272 jalview/util/LinkedIdentityHashSet.js
273 jalview/util/MapList.js
274 jalview/util/MessageManager.js
275 jalview/util/ParseHtmlBodyAndLinks.js
276 jalview/util/Platform.js
277 jalview/util/QuickSort.js
278 jalview/util/StringUtils.js
279 jalview/util/UrlLink.js
280 jalview/util/dialogrunner/DialogRunnerI.js
281 jalview/util/jarInputStreamProvider.js
282 jalview/viewmodel/AlignmentViewport.js
283 jalview/viewmodel/ViewportListenerI.js
284 jalview/viewmodel/ViewportProperties.js
285 jalview/viewmodel/ViewportRanges.js
286 jalview/viewmodel/annotationfilter/AnnotationFilterParameter.js
287 jalview/viewmodel/seqfeatures/FeatureRendererModel.js
288 jalview/viewmodel/seqfeatures/FeatureRendererSettings.js
289 jalview/viewmodel/seqfeatures/FeaturesDisplayed.js
290 jalview/viewmodel/styles/ViewStyle.js
291 jalview/workers/AlignCalcManager2.js
292 jalview/workers/AlignCalcWorker.js
293 jalview/workers/ComplementConsensusThread.js
294 jalview/workers/ConsensusThread.js
295 jalview/workers/ConservationThread.js
296 jalview/workers/InformationThread.js
297 jalview/workers/StrucConsensusThread.js
298 jalview/ws/AWSThread.js
299 jalview/ws/AWsJob.js
300 jalview/ws/JobStateSummary.js
301 jalview/ws/SequenceFetcher.js
302 jalview/ws/ServiceChangeListener.js
303 jalview/ws/WSClient.js
304 jalview/ws/WSClientI.js
305 jalview/ws/WSDiscovererI.js
306 jalview/ws/WSMenuEntryProviderI.js
307 jalview/ws/api/CancellableI.js
308 jalview/ws/api/JalviewServiceEndpointProviderI.js
309 jalview/ws/api/JalviewWebServiceI.js
310 jalview/ws/api/JobId.js
311 jalview/ws/api/MsaI.js
312 jalview/ws/api/MsaResultI.js
313 jalview/ws/api/MultipleSequenceAlignmentI.js
314 jalview/ws/api/SequenceAnnotationServiceI.js
315 jalview/ws/api/ServiceWithParameters.js
316 jalview/ws/api/UIinfo.js
317 jalview/ws/api/WSAnnotationCalcManagerI.js
318 jalview/ws/dbsources/EbiFileRetrievedProxy.js
319 jalview/ws/dbsources/EmblCdsSource.js
320 jalview/ws/dbsources/EmblSource.js
321 jalview/ws/dbsources/EmblXmlSource.js
322 jalview/ws/dbsources/Pdb.js
323 jalview/ws/dbsources/Pfam.js
324 jalview/ws/dbsources/PfamFull.js
325 jalview/ws/dbsources/PfamSeed.js
326 jalview/ws/dbsources/Rfam.js
327 jalview/ws/dbsources/RfamSeed.js
328 jalview/ws/dbsources/Uniprot.js
329 jalview/ws/dbsources/Xfam.js
330 jalview/ws/gui/AnnotationWsJob.js
331 jalview/ws/gui/MsaWSJob.js
332 jalview/ws/gui/MsaWSThread.js
333 jalview/ws/gui/WsJob.js
334 jalview/ws/jws2/Jws2Client.js
335 jalview/ws/jws2/Jws2ClientFactory.js
336 jalview/ws/jws2/Jws2Discoverer.js
337 jalview/ws/jws2/MsaWSClient.js
338 jalview/ws/jws2/PreferredServiceChangeListener.js
339 jalview/ws/jws2/PreferredServiceRegistry.js
340 jalview/ws/jws2/SeqAnnotationServiceCalcWorker.js
341 jalview/ws/jws2/SequenceAnnotationWSClient.js
342 jalview/ws/jws2/dm/AAConSettings.js
343 jalview/ws/params/ArgumentI.js
344 jalview/ws/params/AutoCalcSetting.js
345 jalview/ws/params/OptionI.js
346 jalview/ws/params/ParamDatastoreI.js
347 jalview/ws/params/ParamManager.js
348 jalview/ws/params/ParameterI.js
349 jalview/ws/params/ValueConstrainI.js
350 jalview/ws/params/WsParamSetI.js
351 jalview/ws/params/simple/BooleanOption.js
352 jalview/ws/params/simple/DoubleParameter.js
353 jalview/ws/params/simple/IntegerParameter.js
354 jalview/ws/params/simple/Option.js
355 jalview/ws/params/simple/StringParameter.js
356 jalview/ws/seqfetcher/ASequenceFetcher.js
357 jalview/ws/seqfetcher/DbSourceProxy.js
358 jalview/ws/seqfetcher/DbSourceProxyImpl.js
359 jalview/ws/sifts/SiftsSettings.js
360 jalview/ws/slivkaws/SlivkaAnnotationServiceInstance.js
361 jalview/ws/slivkaws/SlivkaDatastore.js
362 jalview/ws/slivkaws/SlivkaMsaServiceInstance.js
363 jalview/ws/slivkaws/SlivkaParamSet.js
364 jalview/ws/slivkaws/SlivkaWSDiscoverer.js
365 jalview/ws/slivkaws/SlivkaWSInstance.js
366 jalview/ws/uimodel/AlignAnalysisUIText.js
367 jalview/ws/utils/UrlDownloadClient.js
368 jalview/xml/binding/jalview/Annotation.js
369 jalview/xml/binding/jalview/AnnotationElement.js
370 jalview/xml/binding/jalview/Feature.js
371 jalview/xml/binding/jalview/JalviewModel.js
372 jalview/xml/binding/jalview/ObjectFactory.js
373 jalview/xml/binding/jalview/Pdbentry.js
374 jalview/xml/binding/jalview/Sequence.js
375 jalview/xml/binding/jalview/SequenceSet.js
376 jalview/xml/binding/jalview/SequenceType.js
377 jalview/xml/binding/jalview/VAMSAS.js
378 jalview/xml/binding/jalview/WebServiceParameterSet.js
379 java/applet/AppletContext.js
380 java/applet/AppletStub.js
381 java/applet/JSApplet.js
382 java/awt/AWTEvent.js
383 java/awt/AWTEventMulticaster.js
384 java/awt/AWTKeyStroke.js
385 java/awt/ActiveEvent.js
386 java/awt/Adjustable.js
387 java/awt/AlphaComposite.js
388 java/awt/BasicStroke.js
389 java/awt/BorderLayout.js
390 java/awt/CardLayout.js
391 java/awt/Color.js
392 java/awt/Component.js
393 java/awt/ComponentOrientation.js
394 java/awt/Composite.js
395 java/awt/Container.js
396 java/awt/ContainerOrderFocusTraversalPolicy.js
397 java/awt/Cursor.js
398 java/awt/DefaultFocusTraversalPolicy.js
399 java/awt/DefaultKeyboardFocusManager.js
400 java/awt/Desktop.js
401 java/awt/Dialog.js
402 java/awt/Dimension.js
403 java/awt/EventDispatchThread.js
404 java/awt/EventFilter.js
405 java/awt/EventQueue.js
406 java/awt/EventQueueItem.js
407 java/awt/FlowLayout.js
408 java/awt/FocusTraversalPolicy.js
409 java/awt/Font.js
410 java/awt/FontMetrics.js
411 java/awt/GraphicsCallback.js
412 java/awt/GraphicsConfiguration.js
413 java/awt/GraphicsDevice.js
414 java/awt/GraphicsEnvironment.js
415 java/awt/GridBagConstraints.js
416 java/awt/GridBagLayout.js
417 java/awt/GridBagLayoutInfo.js
418 java/awt/GridLayout.js
419 java/awt/Image.js
420 java/awt/ImageMediaEntry.js
421 java/awt/Insets.js
422 java/awt/ItemSelectable.js
423 java/awt/JSComponent.js
424 java/awt/JSDialog.js
425 java/awt/JSFrame.js
426 java/awt/JSPanel.js
427 java/awt/KeyEventDispatcher.js
428 java/awt/KeyEventPostProcessor.js
429 java/awt/KeyboardFocusManager.js
430 java/awt/LayoutManager.js
431 java/awt/LayoutManager2.js
432 java/awt/LightweightDispatcher.js
433 java/awt/MediaEntry.js
434 java/awt/MediaTracker.js
435 java/awt/Paint.js
436 java/awt/Point.js
437 java/awt/Queue.js
438 java/awt/Rectangle.js
439 java/awt/RenderingHints.js
440 java/awt/SentEvent.js
441 java/awt/Shape.js
442 java/awt/Stroke.js
443 java/awt/Taskbar.js
444 java/awt/TextComponent.js
445 java/awt/Toolkit.js
446 java/awt/Transparency.js
447 java/awt/VKCollection.js
448 java/awt/Window.js
449 java/awt/color/ColorSpace.js
450 java/awt/datatransfer/ClipboardOwner.js
451 java/awt/datatransfer/FlavorMap.js
452 java/awt/datatransfer/FlavorTable.js
453 java/awt/datatransfer/SystemFlavorMap.js
454 java/awt/dnd/DropTarget.js
455 java/awt/dnd/DropTargetContext.js
456 java/awt/dnd/DropTargetListener.js
457 java/awt/dnd/peer/DropTargetPeer.js
458 java/awt/event/AWTEventListener.js
459 java/awt/event/ActionEvent.js
460 java/awt/event/ActionListener.js
461 java/awt/event/AdjustmentEvent.js
462 java/awt/event/AdjustmentListener.js
463 java/awt/event/ComponentAdapter.js
464 java/awt/event/ComponentEvent.js
465 java/awt/event/ComponentListener.js
466 java/awt/event/ContainerEvent.js
467 java/awt/event/ContainerListener.js
468 java/awt/event/FocusAdapter.js
469 java/awt/event/FocusEvent.js
470 java/awt/event/FocusListener.js
471 java/awt/event/HierarchyBoundsListener.js
472 java/awt/event/HierarchyEvent.js
473 java/awt/event/HierarchyListener.js
474 java/awt/event/InputEvent.js
475 java/awt/event/InputMethodListener.js
476 java/awt/event/InvocationEvent.js
477 java/awt/event/ItemEvent.js
478 java/awt/event/ItemListener.js
479 java/awt/event/KeyAdapter.js
480 java/awt/event/KeyEvent.js
481 java/awt/event/KeyListener.js
482 java/awt/event/MouseAdapter.js
483 java/awt/event/MouseEvent.js
484 java/awt/event/MouseListener.js
485 java/awt/event/MouseMotionAdapter.js
486 java/awt/event/MouseMotionListener.js
487 java/awt/event/MouseWheelEvent.js
488 java/awt/event/MouseWheelListener.js
489 java/awt/event/TextListener.js
490 java/awt/event/WindowAdapter.js
491 java/awt/event/WindowEvent.js
492 java/awt/event/WindowFocusListener.js
493 java/awt/event/WindowListener.js
494 java/awt/event/WindowStateListener.js
495 java/awt/font/FontRenderContext.js
496 java/awt/font/TextAttribute.js
497 java/awt/geom/AffineTransform.js
498 java/awt/geom/Dimension2D.js
499 java/awt/geom/Path2D.js
500 java/awt/geom/PathIterator.js
501 java/awt/geom/Point2D.js
502 java/awt/geom/RectIterator.js
503 java/awt/geom/Rectangle2D.js
504 java/awt/geom/RectangularShape.js
505 java/awt/image/BufferedImage.js
506 java/awt/image/ColorModel.js
507 java/awt/image/DataBuffer.js
508 java/awt/image/DataBufferInt.js
509 java/awt/image/DirectColorModel.js
510 java/awt/image/ImageConsumer.js
511 java/awt/image/ImageObserver.js
512 java/awt/image/ImageProducer.js
513 java/awt/image/PackedColorModel.js
514 java/awt/image/PixelGrabber.js
515 java/awt/image/Raster.js
516 java/awt/image/RenderedImage.js
517 java/awt/image/SampleModel.js
518 java/awt/image/SinglePixelPackedSampleModel.js
519 java/awt/image/WritableRaster.js
520 java/awt/peer/ComponentPeer.js
521 java/awt/peer/ContainerPeer.js
522 java/awt/peer/DialogPeer.js
523 java/awt/peer/FramePeer.js
524 java/awt/peer/KeyboardFocusManagerPeer.js
525 java/awt/peer/LightweightPeer.js
526 java/awt/peer/WindowPeer.js
527 java/awt/print/Printable.js
528 java/beans/ChangeListenerMap.js
529 java/beans/PropertyChangeEvent.js
530 java/beans/PropertyChangeListener.js
531 java/beans/PropertyChangeSupport.js
532 java/io/BufferedInputStream.js
533 java/io/BufferedReader.js
534 java/io/BufferedWriter.js
535 java/io/ByteArrayInputStream.js
536 java/io/ByteArrayOutputStream.js
537 java/io/Closeable.js
538 java/io/DataInput.js
539 java/io/DataInputStream.js
540 java/io/File.js
541 java/io/FileDescriptor.js
542 java/io/FileInputStream.js
543 java/io/FileOutputStream.js
544 java/io/FileReader.js
545 java/io/FileSystem.js
546 java/io/FilenameFilter.js
547 java/io/FilterInputStream.js
548 java/io/FilterOutputStream.js
549 java/io/InputStream.js
550 java/io/InputStreamReader.js
551 java/io/ObjectStreamField.js
552 java/io/OutputStream.js
553 java/io/OutputStreamWriter.js
554 java/io/PrintStream.js
555 java/io/PrintWriter.js
556 java/io/Reader.js
557 java/io/StringReader.js
558 java/io/StringWriter.js
559 java/io/Writer.js
560 java/lang/AbstractStringBuilder.js
561 java/lang/AutoCloseable.js
562 java/lang/Class.js
563 java/lang/Enum.js
564 java/lang/Iterable.js
565 java/lang/Readable.js
566 java/lang/Runtime.js
567 java/lang/RuntimePermission.js
568 java/lang/StringBuffer.js
569 java/lang/StringBuilder.js
570 java/lang/Thread.js
571 java/lang/ThreadGroup.js
572 java/lang/ThreadLocal.js
573 java/lang/ref/Reference.js
574 java/lang/ref/ReferenceQueue.js
575 java/lang/ref/WeakReference.js
576 java/lang/reflect/AccessibleObject.js
577 java/lang/reflect/AnnotatedElement.js
578 java/lang/reflect/Constructor.js
579 java/lang/reflect/Field.js
580 java/lang/reflect/Method.js
581 java/math/BigDecimal.js
582 java/math/BigInteger.js
583 java/math/MathContext.js
584 java/math/RoundingMode.js
585 java/net/ContentHandler.js
586 java/net/HttpURLConnection.js
587 java/net/URI.js
588 java/net/URL.js
589 java/net/URLConnection.js
590 java/net/URLStreamHandler.js
591 java/net/URLStreamHandlerFactory.js
592 java/security/AccessController.js
593 java/security/BasicPermission.js
594 java/security/Guard.js
595 java/security/Permission.js
596 java/security/PrivilegedAction.js
597 java/security/PrivilegedExceptionAction.js
598 java/text/AttributedCharacterIterator.js
599 java/text/CharacterIterator.js
600 java/text/DateFormat.js
601 java/text/DateFormatSymbols.js
602 java/text/DecimalFormat.js
603 java/text/DecimalFormatSymbols.js
604 java/text/DigitList.js
605 java/text/FieldPosition.js
606 java/text/Format.js
607 java/text/MessageFormat.js
608 java/text/NumberFormat.js
609 java/text/ParsePosition.js
610 java/text/SimpleDateFormat.js
611 java/text/spi/BreakIteratorProvider.js
612 java/text/spi/CollatorProvider.js
613 java/text/spi/DateFormatProvider.js
614 java/text/spi/DateFormatSymbolsProvider.js
615 java/text/spi/DecimalFormatSymbolsProvider.js
616 java/text/spi/NumberFormatProvider.js
617 java/util/AbstractCollection.js
618 java/util/AbstractList.js
619 java/util/AbstractMap.js
620 java/util/AbstractQueue.js
621 java/util/AbstractSequentialList.js
622 java/util/AbstractSet.js
623 java/util/ArrayDeque.js
624 java/util/ArrayList.js
625 java/util/Arrays.js
626 java/util/BitSet.js
627 java/util/Calendar.js
628 java/util/Collection.js
629 java/util/Collections.js
630 java/util/ComparableTimSort.js
631 java/util/Comparator.js
632 java/util/Deque.js
633 java/util/Dictionary.js
634 java/util/DualPivotQuicksort.js
635 java/util/EnumMap.js
636 java/util/Enumeration.js
637 java/util/EventListener.js
638 java/util/EventObject.js
639 java/util/Formatter.js
640 java/util/GregorianCalendar.js
641 java/util/HashMap.js
642 java/util/HashSet.js
643 java/util/Hashtable.js
644 java/util/IdentityHashMap.js
645 java/util/ImmutableCollections.js
646 java/util/Iterator.js
647 java/util/LinkedHashMap.js
648 java/util/LinkedHashSet.js
649 java/util/LinkedList.js
650 java/util/List.js
651 java/util/ListIterator.js
652 java/util/Locale.js
653 java/util/Map.js
654 java/util/NavigableMap.js
655 java/util/NavigableSet.js
656 java/util/Objects.js
657 java/util/PriorityQueue.js
658 java/util/Properties.js
659 java/util/PropertyResourceBundle.js
660 java/util/Queue.js
661 java/util/Random.js
662 java/util/RandomAccess.js
663 java/util/ResourceBundle.js
664 java/util/ServiceLoader.js
665 java/util/Set.js
666 java/util/SortedMap.js
667 java/util/SortedSet.js
668 java/util/Spliterator.js
669 java/util/StringTokenizer.js
670 java/util/TimSort.js
671 java/util/TimeZone.js
672 java/util/TreeMap.js
673 java/util/TreeSet.js
674 java/util/Vector.js
675 java/util/WeakHashMap.js
676 java/util/concurrent/AbstractExecutorService.js
677 java/util/concurrent/BlockingQueue.js
678 java/util/concurrent/Callable.js
679 java/util/concurrent/CompletableFuture.js
680 java/util/concurrent/CompletionStage.js
681 java/util/concurrent/ConcurrentHashMap.js
682 java/util/concurrent/ConcurrentMap.js
683 java/util/concurrent/CopyOnWriteArrayList.js
684 java/util/concurrent/CopyOnWriteArraySet.js
685 java/util/concurrent/DelayQueue.js
686 java/util/concurrent/Delayed.js
687 java/util/concurrent/Executor.js
688 java/util/concurrent/ExecutorService.js
689 java/util/concurrent/Executors.js
690 java/util/concurrent/ForkJoinPool.js
691 java/util/concurrent/ForkJoinTask.js
692 java/util/concurrent/Future.js
693 java/util/concurrent/FutureTask.js
694 java/util/concurrent/LinkedBlockingQueue.js
695 java/util/concurrent/RejectedExecutionHandler.js
696 java/util/concurrent/RunnableFuture.js
697 java/util/concurrent/RunnableScheduledFuture.js
698 java/util/concurrent/ScheduledExecutorService.js
699 java/util/concurrent/ScheduledFuture.js
700 java/util/concurrent/ScheduledThreadPoolExecutor.js
701 java/util/concurrent/Semaphore.js
702 java/util/concurrent/ThreadFactory.js
703 java/util/concurrent/ThreadPoolExecutor.js
704 java/util/concurrent/TimeUnit.js
705 java/util/concurrent/atomic/AtomicInteger.js
706 java/util/concurrent/atomic/AtomicLong.js
707 java/util/concurrent/locks/AbstractOwnableSynchronizer.js
708 java/util/concurrent/locks/AbstractQueuedSynchronizer.js
709 java/util/concurrent/locks/Condition.js
710 java/util/concurrent/locks/Lock.js
711 java/util/concurrent/locks/ReadWriteLock.js
712 java/util/concurrent/locks/ReentrantLock.js
713 java/util/concurrent/locks/ReentrantReadWriteLock.js
714 java/util/function/Consumer.js
715 java/util/function/Function.js
716 java/util/function/Predicate.js
717 java/util/function/Supplier.js
718 java/util/jar/JarEntry.js
719 java/util/jar/JarInputStream.js
720 java/util/regex/MatchResult.js
721 java/util/regex/Matcher.js
722 java/util/regex/Pattern.js
723 java/util/spi/CalendarDataProvider.js
724 java/util/spi/CurrencyNameProvider.js
725 java/util/spi/LocaleNameProvider.js
726 java/util/spi/LocaleServiceProvider.js
727 java/util/spi/TimeZoneNameProvider.js
728 java/util/stream/AbstractPipeline.js
729 java/util/stream/BaseStream.js
730 java/util/stream/MatchOps.js
731 java/util/stream/PipelineHelper.js
732 java/util/stream/ReferencePipeline.js
733 java/util/stream/Sink.js
734 java/util/stream/Stream.js
735 java/util/stream/StreamOpFlag.js
736 java/util/stream/StreamShape.js
737 java/util/stream/StreamSupport.js
738 java/util/stream/TerminalOp.js
739 java/util/zip/CRC32.js
740 java/util/zip/Inflater.js
741 java/util/zip/InflaterInputStream.js
742 java/util/zip/ZipConstants.js
743 java/util/zip/ZipEntry.js
744 java/util/zip/ZipInputStream.js
745 javajs/api/BytePoster.js
746 javajs/api/GenericLineReader.js
747 javajs/api/GenericOutputChannel.js
748 javajs/api/JSONEncodable.js
749 javajs/async/SwingJSUtils.js
750 javajs/http/ClientProtocolException.js
751 javajs/http/HttpClient.js
752 javajs/http/HttpClientFactory.js
753 javajs/http/SimpleHttpClient.js
754 javajs/util/A4.js
755 javajs/util/AU.js
756 javajs/util/AjaxURLConnection.js
757 javajs/util/AjaxURLStreamHandler.js
758 javajs/util/AjaxURLStreamHandlerFactory.js
759 javajs/util/BS.js
760 javajs/util/Base64.js
761 javajs/util/CU.js
762 javajs/util/DF.js
763 javajs/util/Encoding.js
764 javajs/util/JSThread.js
765 javajs/util/LimitedLineReader.js
766 javajs/util/Lst.js
767 javajs/util/M3.js
768 javajs/util/M34.js
769 javajs/util/M4.js
770 javajs/util/OC.js
771 javajs/util/P3.js
772 javajs/util/P3i.js
773 javajs/util/P4.js
774 javajs/util/PT.js
775 javajs/util/Rdr.js
776 javajs/util/SB.js
777 javajs/util/T3.js
778 javajs/util/T3i.js
779 javajs/util/T4.js
780 javajs/util/V3.js
781 javax/net/ssl/HttpsURLConnection.js
782 javax/swing/AbstractAction.js
783 javax/swing/AbstractButton.js
784 javax/swing/AbstractCellEditor.js
785 javax/swing/AbstractListModel.js
786 javax/swing/AbstractSpinnerModel.js
787 javax/swing/Action.js
788 javax/swing/ActionMap.js
789 javax/swing/AncestorNotifier.js
790 javax/swing/ArrayTable.js
791 javax/swing/Autoscroller.js
792 javax/swing/BorderFactory.js
793 javax/swing/BoundedRangeModel.js
794 javax/swing/Box.js
795 javax/swing/BoxLayout.js
796 javax/swing/ButtonGroup.js
797 javax/swing/ButtonModel.js
798 javax/swing/CellEditor.js
799 javax/swing/CellRendererPane.js
800 javax/swing/ClientPropertyKey.js
801 javax/swing/ComboBoxEditor.js
802 javax/swing/ComboBoxModel.js
803 javax/swing/ComponentInputMap.js
804 javax/swing/DefaultBoundedRangeModel.js
805 javax/swing/DefaultButtonModel.js
806 javax/swing/DefaultComboBoxModel.js
807 javax/swing/DefaultDesktopManager.js
808 javax/swing/DefaultListCellRenderer.js
809 javax/swing/DefaultListSelectionModel.js
810 javax/swing/DefaultRowSorter.js
811 javax/swing/DefaultSingleSelectionModel.js
812 javax/swing/DesktopManager.js
813 javax/swing/DropMode.js
814 javax/swing/FocusManager.js
815 javax/swing/Icon.js
816 javax/swing/ImageIcon.js
817 javax/swing/InputMap.js
818 javax/swing/InternalFrameFocusTraversalPolicy.js
819 javax/swing/JApplet.js
820 javax/swing/JButton.js
821 javax/swing/JCheckBox.js
822 javax/swing/JCheckBoxMenuItem.js
823 javax/swing/JComboBox.js
824 javax/swing/JComponent.js
825 javax/swing/JDesktopPane.js
826 javax/swing/JDialog.js
827 javax/swing/JFileChooser.js
828 javax/swing/JFormattedTextField.js
829 javax/swing/JFrame.js
830 javax/swing/JInternalFrame.js
831 javax/swing/JLabel.js
832 javax/swing/JLayeredPane.js
833 javax/swing/JList.js
834 javax/swing/JMenu.js
835 javax/swing/JMenuBar.js
836 javax/swing/JMenuItem.js
837 javax/swing/JOptionPane.js
838 javax/swing/JPanel.js
839 javax/swing/JPopupMenu.js
840 javax/swing/JProgressBar.js
841 javax/swing/JRadioButton.js
842 javax/swing/JRadioButtonMenuItem.js
843 javax/swing/JRootPane.js
844 javax/swing/JScrollBar.js
845 javax/swing/JScrollPane.js
846 javax/swing/JSeparator.js
847 javax/swing/JSlider.js
848 javax/swing/JSpinner.js
849 javax/swing/JTabbedPane.js
850 javax/swing/JTable.js
851 javax/swing/JTextArea.js
852 javax/swing/JTextField.js
853 javax/swing/JToggleButton.js
854 javax/swing/JToolTip.js
855 javax/swing/JViewport.js
856 javax/swing/JWindow.js
857 javax/swing/KeyStroke.js
858 javax/swing/KeyboardManager.js
859 javax/swing/LayoutComparator.js
860 javax/swing/LayoutFocusTraversalPolicy.js
861 javax/swing/ListCellRenderer.js
862 javax/swing/ListModel.js
863 javax/swing/ListSelectionModel.js
864 javax/swing/LookAndFeel.js
865 javax/swing/MenuElement.js
866 javax/swing/MenuSelectionManager.js
867 javax/swing/MutableComboBoxModel.js
868 javax/swing/Popup.js
869 javax/swing/PopupFactory.js
870 javax/swing/RepaintManager.js
871 javax/swing/RootPaneContainer.js
872 javax/swing/RowFilter.js
873 javax/swing/RowSorter.js
874 javax/swing/ScrollPaneConstants.js
875 javax/swing/ScrollPaneLayout.js
876 javax/swing/Scrollable.js
877 javax/swing/SingleSelectionModel.js
878 javax/swing/SizeRequirements.js
879 javax/swing/SortOrder.js
880 javax/swing/SortingFocusTraversalPolicy.js
881 javax/swing/SpinnerModel.js
882 javax/swing/SpinnerNumberModel.js
883 javax/swing/Spring.js
884 javax/swing/SpringLayout.js
885 javax/swing/SwingConstants.js
886 javax/swing/SwingContainerOrderFocusTraversalPolicy.js
887 javax/swing/SwingDefaultFocusTraversalPolicy.js
888 javax/swing/SwingPaintEventDispatcher.js
889 javax/swing/SwingUtilities.js
890 javax/swing/Timer.js
891 javax/swing/ToolTipManager.js
892 javax/swing/TransferHandler.js
893 javax/swing/UIDefaults.js
894 javax/swing/UIManager.js
895 javax/swing/ViewportLayout.js
896 javax/swing/WindowConstants.js
897 javax/swing/border/AbstractBorder.js
898 javax/swing/border/BevelBorder.js
899 javax/swing/border/Border.js
900 javax/swing/border/CompoundBorder.js
901 javax/swing/border/EmptyBorder.js
902 javax/swing/border/EtchedBorder.js
903 javax/swing/border/LineBorder.js
904 javax/swing/border/TitledBorder.js
905 javax/swing/event/AncestorEvent.js
906 javax/swing/event/AncestorListener.js
907 javax/swing/event/CaretEvent.js
908 javax/swing/event/CaretListener.js
909 javax/swing/event/CellEditorListener.js
910 javax/swing/event/ChangeEvent.js
911 javax/swing/event/ChangeListener.js
912 javax/swing/event/DocumentEvent.js
913 javax/swing/event/DocumentListener.js
914 javax/swing/event/EventListenerList.js
915 javax/swing/event/HyperlinkListener.js
916 javax/swing/event/InternalFrameAdapter.js
917 javax/swing/event/InternalFrameEvent.js
918 javax/swing/event/InternalFrameListener.js
919 javax/swing/event/ListDataEvent.js
920 javax/swing/event/ListDataListener.js
921 javax/swing/event/ListSelectionEvent.js
922 javax/swing/event/ListSelectionListener.js
923 javax/swing/event/MenuEvent.js
924 javax/swing/event/MenuKeyListener.js
925 javax/swing/event/MenuListener.js
926 javax/swing/event/MouseInputListener.js
927 javax/swing/event/RowSorterEvent.js
928 javax/swing/event/RowSorterListener.js
929 javax/swing/event/SwingPropertyChangeSupport.js
930 javax/swing/event/TableColumnModelEvent.js
931 javax/swing/event/TableColumnModelListener.js
932 javax/swing/event/TableModelEvent.js
933 javax/swing/event/TableModelListener.js
934 javax/swing/event/UndoableEditEvent.js
935 javax/swing/event/UndoableEditListener.js
936 javax/swing/filechooser/FileFilter.js
937 javax/swing/filechooser/FileView.js
938 javax/swing/plaf/ActionMapUIResource.js
939 javax/swing/plaf/BorderUIResource.js
940 javax/swing/plaf/ColorUIResource.js
941 javax/swing/plaf/ComponentInputMapUIResource.js
942 javax/swing/plaf/ComponentUI.js
943 javax/swing/plaf/DimensionUIResource.js
944 javax/swing/plaf/FontUIResource.js
945 javax/swing/plaf/InputMapUIResource.js
946 javax/swing/plaf/InsetsUIResource.js
947 javax/swing/plaf/UIResource.js
948 javax/swing/plaf/basic/BasicBorders.js
949 javax/swing/plaf/basic/BasicGraphicsUtils.js
950 javax/swing/table/AbstractTableModel.js
951 javax/swing/table/DefaultTableCellRenderer.js
952 javax/swing/table/DefaultTableColumnModel.js
953 javax/swing/table/DefaultTableModel.js
954 javax/swing/table/JTableHeader.js
955 javax/swing/table/TableCellEditor.js
956 javax/swing/table/TableCellRenderer.js
957 javax/swing/table/TableColumn.js
958 javax/swing/table/TableColumnModel.js
959 javax/swing/table/TableModel.js
960 javax/swing/table/TableRowSorter.js
961 javax/swing/text/AbstractDocument.js
962 javax/swing/text/AttributeSet.js
963 javax/swing/text/BoxView.js
964 javax/swing/text/Caret.js
965 javax/swing/text/CompositeView.js
966 javax/swing/text/DefaultCaret.js
967 javax/swing/text/DefaultEditorKit.js
968 javax/swing/text/DefaultFormatter.js
969 javax/swing/text/DefaultFormatterFactory.js
970 javax/swing/text/Document.js
971 javax/swing/text/DocumentFilter.js
972 javax/swing/text/EditorKit.js
973 javax/swing/text/Element.js
974 javax/swing/text/GapContent.js
975 javax/swing/text/GapVector.js
976 javax/swing/text/InternationalFormatter.js
977 javax/swing/text/JTextComponent.js
978 javax/swing/text/MutableAttributeSet.js
979 javax/swing/text/NumberFormatter.js
980 javax/swing/text/PlainDocument.js
981 javax/swing/text/PlainView.js
982 javax/swing/text/Position.js
983 javax/swing/text/Segment.js
984 javax/swing/text/SegmentCache.js
985 javax/swing/text/SimpleAttributeSet.js
986 javax/swing/text/Style.js
987 javax/swing/text/StyleConstants.js
988 javax/swing/text/StyleContext.js
989 javax/swing/text/TabExpander.js
990 javax/swing/text/TextAction.js
991 javax/swing/text/Utilities.js
992 javax/swing/text/View.js
993 javax/swing/text/WrappedPlainView.js
994 javax/swing/tree/TreeNode.js
995 javax/swing/undo/AbstractUndoableEdit.js
996 javax/swing/undo/CompoundEdit.js
997 javax/swing/undo/UndoableEdit.js
998 javax/xml/bind/ContextFinder.js
999 javax/xml/bind/GetPropertyAction.js
1000 javax/xml/bind/JAXBContext.js
1001 javax/xml/bind/JAXBContextFactory.js
1002 javax/xml/bind/JAXBElement.js
1003 javax/xml/bind/ModuleUtil.js
1004 javax/xml/bind/ServiceLoaderUtil.js
1005 javax/xml/bind/Unmarshaller.js
1006 javax/xml/bind/ValidationEventHandler.js
1007 javax/xml/bind/annotation/adapters/CollapsedStringAdapter.js
1008 javax/xml/bind/annotation/adapters/XmlAdapter.js
1009 javax/xml/bind/helpers/AbstractUnmarshallerImpl.js
1010 javax/xml/bind/helpers/DefaultValidationEventHandler.js
1011 javax/xml/datatype/DatatypeFactory.js
1012 javax/xml/datatype/FactoryFinder.js
1013 javax/xml/datatype/SecuritySupport.js
1014 javax/xml/datatype/XMLGregorianCalendar.js
1015 javax/xml/namespace/QName.js
1016 javax/xml/stream/XMLInputFactory.js
1017 javax/xml/stream/XMLStreamConstants.js
1018 javax/xml/stream/XMLStreamReader.js
1019 net/miginfocom/layout/AC.js
1020 net/miginfocom/layout/AnimSpec.js
1021 net/miginfocom/layout/BoundSize.js
1022 net/miginfocom/layout/CC.js
1023 net/miginfocom/layout/ComponentWrapper.js
1024 net/miginfocom/layout/ConstraintParser.js
1025 net/miginfocom/layout/ContainerWrapper.js
1026 net/miginfocom/layout/DimConstraint.js
1027 net/miginfocom/layout/Grid.js
1028 net/miginfocom/layout/LC.js
1029 net/miginfocom/layout/LayoutUtil.js
1030 net/miginfocom/layout/LinkHandler.js
1031 net/miginfocom/layout/PlatformDefaults.js
1032 net/miginfocom/layout/ResizeConstraint.js
1033 net/miginfocom/layout/UnitValue.js
1034 net/miginfocom/swing/MigLayout.js
1035 net/miginfocom/swing/SwingComponentWrapper.js
1036 net/miginfocom/swing/SwingContainerWrapper.js
1037 org/apache/xerces/jaxp/datatype/DatatypeFactoryImpl.js
1038 org/apache/xerces/jaxp/datatype/XMLGregorianCalendarImpl.js
1039 org/jmol/adapter/readers/pdb/PdbReader.js
1040 org/jmol/adapter/smarter/Atom.js
1041 org/jmol/adapter/smarter/AtomIterator.js
1042 org/jmol/adapter/smarter/AtomSetCollection.js
1043 org/jmol/adapter/smarter/AtomSetCollectionReader.js
1044 org/jmol/adapter/smarter/AtomSetObject.js
1045 org/jmol/adapter/smarter/Bond.js
1046 org/jmol/adapter/smarter/BondIterator.js
1047 org/jmol/adapter/smarter/Resolver.js
1048 org/jmol/adapter/smarter/SmarterJmolAdapter.js
1049 org/jmol/adapter/smarter/Structure.js
1050 org/jmol/adapter/smarter/StructureIterator.js
1051 org/jmol/api/AtomIndexIterator.js
1052 org/jmol/api/EventManager.js
1053 org/jmol/api/FontManager.js
1054 org/jmol/api/GenericFileInterface.js
1055 org/jmol/api/GenericMouseInterface.js
1056 org/jmol/api/GenericPlatform.js
1057 org/jmol/api/Interface.js
1058 org/jmol/api/JmolAdapter.js
1059 org/jmol/api/JmolAdapterAtomIterator.js
1060 org/jmol/api/JmolAdapterBondIterator.js
1061 org/jmol/api/JmolAdapterStructureIterator.js
1062 org/jmol/api/JmolCallbackListener.js
1063 org/jmol/api/JmolGraphicsInterface.js
1064 org/jmol/api/JmolMeasurementClient.js
1065 org/jmol/api/JmolPropertyManager.js
1066 org/jmol/api/JmolRendererInterface.js
1067 org/jmol/api/JmolRepaintManager.js
1068 org/jmol/api/JmolScriptEvaluator.js
1069 org/jmol/api/JmolScriptFunction.js
1070 org/jmol/api/JmolScriptManager.js
1071 org/jmol/api/JmolSelectionListener.js
1072 org/jmol/api/JmolStatusListener.js
1073 org/jmol/api/JmolViewer.js
1074 org/jmol/api/PlatformViewer.js
1075 org/jmol/api/SymmetryInterface.js
1076 org/jmol/api/Translator.js
1077 org/jmol/atomdata/AtomDataServer.js
1078 org/jmol/atomdata/RadiusData.js
1079 org/jmol/awt/AwtFile.js
1080 org/jmol/awt/AwtFont.js
1081 org/jmol/awt/Display.js
1082 org/jmol/awt/Image.js
1083 org/jmol/awt/Mouse.js
1084 org/jmol/awt/Platform.js
1085 org/jmol/bspt/Bspf.js
1086 org/jmol/bspt/Bspt.js
1087 org/jmol/bspt/CubeIterator.js
1088 org/jmol/bspt/Element.js
1089 org/jmol/bspt/Leaf.js
1090 org/jmol/bspt/Node.js
1091 org/jmol/c/CBK.js
1092 org/jmol/c/FIL.js
1093 org/jmol/c/PAL.js
1094 org/jmol/c/STER.js
1095 org/jmol/c/STR.js
1096 org/jmol/c/VDW.js
1097 org/jmol/g3d/CylinderRenderer.js
1098 org/jmol/g3d/G3DRenderer.js
1099 org/jmol/g3d/Graphics3D.js
1100 org/jmol/g3d/HermiteRenderer.js
1101 org/jmol/g3d/LineRenderer.js
1102 org/jmol/g3d/Pixelator.js
1103 org/jmol/g3d/Platform3D.js
1104 org/jmol/g3d/PrecisionRenderer.js
1105 org/jmol/g3d/SphereRenderer.js
1106 org/jmol/g3d/TextRenderer.js
1107 org/jmol/g3d/TextString.js
1108 org/jmol/g3d/TriangleRenderer.js
1109 org/jmol/i18n/GT.js
1110 org/jmol/i18n/Language.js
1111 org/jmol/i18n/Resource.js
1112 org/jmol/io/FileReader.js
1113 org/jmol/modelset/Atom.js
1114 org/jmol/modelset/AtomCollection.js
1115 org/jmol/modelset/AtomIteratorWithinModel.js
1116 org/jmol/modelset/Bond.js
1117 org/jmol/modelset/BondCollection.js
1118 org/jmol/modelset/BondIterator.js
1119 org/jmol/modelset/BondIteratorSelected.js
1120 org/jmol/modelset/Chain.js
1121 org/jmol/modelset/Group.js
1122 org/jmol/modelset/LabelToken.js
1123 org/jmol/modelset/Measurement.js
1124 org/jmol/modelset/MeasurementData.js
1125 org/jmol/modelset/MeasurementPending.js
1126 org/jmol/modelset/Model.js
1127 org/jmol/modelset/ModelLoader.js
1128 org/jmol/modelset/ModelSet.js
1129 org/jmol/modelset/Orientation.js
1130 org/jmol/modelset/Structure.js
1131 org/jmol/modelset/Text.js
1132 org/jmol/modelset/TickInfo.js
1133 org/jmol/modelsetbio/AlphaMonomer.js
1134 org/jmol/modelsetbio/AlphaPolymer.js
1135 org/jmol/modelsetbio/AminoMonomer.js
1136 org/jmol/modelsetbio/AminoPolymer.js
1137 org/jmol/modelsetbio/BioModel.js
1138 org/jmol/modelsetbio/BioModelSet.js
1139 org/jmol/modelsetbio/BioPolymer.js
1140 org/jmol/modelsetbio/BioResolver.js
1141 org/jmol/modelsetbio/Helix.js
1142 org/jmol/modelsetbio/Monomer.js
1143 org/jmol/modelsetbio/ProteinStructure.js
1144 org/jmol/modelsetbio/Sheet.js
1145 org/jmol/render/BallsRenderer.js
1146 org/jmol/render/BbcageRenderer.js
1147 org/jmol/render/CageRenderer.js
1148 org/jmol/render/FontLineShapeRenderer.js
1149 org/jmol/render/FrankRenderer.js
1150 org/jmol/render/HoverRenderer.js
1151 org/jmol/render/LabelsRenderer.js
1152 org/jmol/render/MeasuresRenderer.js
1153 org/jmol/render/RepaintManager.js
1154 org/jmol/render/ShapeRenderer.js
1155 org/jmol/render/SticksRenderer.js
1156 org/jmol/render/TextRenderer.js
1157 org/jmol/render/UccageRenderer.js
1158 org/jmol/renderbio/BioShapeRenderer.js
1159 org/jmol/renderbio/CartoonRenderer.js
1160 org/jmol/renderbio/RocketsRenderer.js
1161 org/jmol/renderbio/StrandsRenderer.js
1162 org/jmol/script/ContextToken.js
1163 org/jmol/script/SV.js
1164 org/jmol/script/ScriptCompiler.js
1165 org/jmol/script/ScriptContext.js
1166 org/jmol/script/ScriptError.js
1167 org/jmol/script/ScriptEval.js
1168 org/jmol/script/ScriptExpr.js
1169 org/jmol/script/ScriptFlowContext.js
1170 org/jmol/script/ScriptFunction.js
1171 org/jmol/script/ScriptManager.js
1172 org/jmol/script/ScriptMathProcessor.js
1173 org/jmol/script/ScriptParam.js
1174 org/jmol/script/ScriptTokenParser.js
1175 org/jmol/script/T.js
1176 org/jmol/scriptext/CmdExt.js
1177 org/jmol/scriptext/MathExt.js
1178 org/jmol/scriptext/ScriptExt.js
1179 org/jmol/shape/AtomShape.js
1180 org/jmol/shape/Balls.js
1181 org/jmol/shape/Bbcage.js
1182 org/jmol/shape/FontLineShape.js
1183 org/jmol/shape/Frank.js
1184 org/jmol/shape/Hover.js
1185 org/jmol/shape/Labels.js
1186 org/jmol/shape/Measures.js
1187 org/jmol/shape/Mesh.js
1188 org/jmol/shape/Shape.js
1189 org/jmol/shape/Sticks.js
1190 org/jmol/shape/TextShape.js
1191 org/jmol/shape/Uccage.js
1192 org/jmol/shapebio/BioShape.js
1193 org/jmol/shapebio/BioShapeCollection.js
1194 org/jmol/shapebio/Cartoon.js
1195 org/jmol/shapebio/Rockets.js
1196 org/jmol/symmetry/Symmetry.js
1197 org/jmol/symmetry/SymmetryInfo.js
1198 org/jmol/symmetry/UnitCell.js
1199 org/jmol/thread/HoverWatcherThread.js
1200 org/jmol/thread/JmolThread.js
1201 org/jmol/thread/TimeoutThread.js
1202 org/jmol/util/BSUtil.js
1203 org/jmol/util/BoxInfo.js
1204 org/jmol/util/C.js
1205 org/jmol/util/ColorEncoder.js
1206 org/jmol/util/CommandHistory.js
1207 org/jmol/util/DefaultLogger.js
1208 org/jmol/util/Edge.js
1209 org/jmol/util/Elements.js
1210 org/jmol/util/Escape.js
1211 org/jmol/util/Font.js
1212 org/jmol/util/GData.js
1213 org/jmol/util/Geodesic.js
1214 org/jmol/util/Int2IntHash.js
1215 org/jmol/util/Int2IntHashEntry.js
1216 org/jmol/util/Logger.js
1217 org/jmol/util/LoggerInterface.js
1218 org/jmol/util/MeshSurface.js
1219 org/jmol/util/Node.js
1220 org/jmol/util/Normix.js
1221 org/jmol/util/Point3fi.js
1222 org/jmol/util/Rectangle.js
1223 org/jmol/util/Rgb16.js
1224 org/jmol/util/Shader.js
1225 org/jmol/util/SimpleEdge.js
1226 org/jmol/util/SimpleNode.js
1227 org/jmol/util/SimpleUnitCell.js
1228 org/jmol/util/TempArray.js
1229 org/jmol/viewer/ActionManager.js
1230 org/jmol/viewer/AnimationManager.js
1231 org/jmol/viewer/ColorManager.js
1232 org/jmol/viewer/FileManager.js
1233 org/jmol/viewer/Gesture.js
1234 org/jmol/viewer/GlobalSettings.js
1235 org/jmol/viewer/JC.js
1236 org/jmol/viewer/ModelManager.js
1237 org/jmol/viewer/MotionPoint.js
1238 org/jmol/viewer/MouseState.js
1239 org/jmol/viewer/PropertyManager.js
1240 org/jmol/viewer/SelectionManager.js
1241 org/jmol/viewer/ShapeManager.js
1242 org/jmol/viewer/StateManager.js
1243 org/jmol/viewer/StatusManager.js
1244 org/jmol/viewer/TransformManager.js
1245 org/jmol/viewer/Viewer.js
1246 org/jmol/viewer/binding/Binding.js
1247 org/jmol/viewer/binding/JmolBinding.js
1248 org/json/JSONArray.js
1249 org/json/JSONException.js
1250 org/json/JSONObject.js
1251 org/json/JSONTokener.js
1252 org/xml/sax/AttributeList.js
1253 org/xml/sax/Attributes.js
1254 org/xml/sax/ContentHandler.js
1255 org/xml/sax/InputSource.js
1256 org/xml/sax/Parser.js
1257 org/xml/sax/XMLReader.js
1258 org/xml/sax/ext/Attributes2.js
1259 sun/awt/AWTAutoShutdown.js
1260 sun/awt/AppContext.js
1261 sun/awt/CausedFocusEvent.js
1262 sun/awt/ComponentFactory.js
1263 sun/awt/EventQueueItem.js
1264 sun/awt/MostRecentKeyValue.js
1265 sun/awt/MostRecentThreadAppContext.js
1266 sun/awt/PaintEventDispatcher.js
1267 sun/awt/PostEventQueue.js
1268 sun/awt/RequestFocusController.js
1269 sun/awt/SunGraphicsCallback.js
1270 sun/awt/SunToolkit.js
1271 sun/awt/image/DataStealer.js
1272 sun/awt/image/IntegerComponentRaster.js
1273 sun/awt/image/IntegerInterleavedRaster.js
1274 sun/awt/image/OffScreenImageSource.js
1275 sun/awt/image/SunWritableRaster.js
1276 sun/font/AttributeValues.js
1277 sun/font/EAttribute.js
1278 sun/font/FontDesignMetrics.js
1279 sun/java2d/StateTrackable.js
1280 sun/java2d/StateTrackableDelegate.js
1281 sun/misc/Unsafe.js
1282 sun/swing/DefaultLookup.js
1283 sun/swing/StringUIClientPropertyKey.js
1284 sun/swing/SwingLazyValue.js
1285 sun/swing/SwingUtilities2.js
1286 sun/swing/UIAction.js
1287 sun/swing/UIClientPropertyKey.js
1288 sun/swing/table/DefaultTableCellHeaderRenderer.js
1289 sun/text/resources/FormatData.js
1290 sun/text/resources/en/FormatData_en.js
1291 sun/text/resources/en/FormatData_en_GB.js
1292 sun/text/resources/en/FormatData_en_US.js
1293 sun/util/calendar/AbstractCalendar.js
1294 sun/util/calendar/BaseCalendar.js
1295 sun/util/calendar/CalendarDate.js
1296 sun/util/calendar/CalendarSystem.js
1297 sun/util/calendar/CalendarUtils.js
1298 sun/util/calendar/Gregorian.js
1299 sun/util/calendar/ZoneInfo.js
1300 sun/util/calendar/ZoneInfoFile.js
1301 sun/util/locale/BaseLocale.js
1302 sun/util/locale/LanguageTag.js
1303 sun/util/locale/LocaleUtils.js
1304 sun/util/locale/provider/AuxLocaleProviderAdapter.js
1305 sun/util/locale/provider/AvailableLanguageTags.js
1306 sun/util/locale/provider/CalendarDataProviderImpl.js
1307 sun/util/locale/provider/CalendarDataUtility.js
1308 sun/util/locale/provider/CalendarProviderImpl.js
1309 sun/util/locale/provider/DateFormatProviderImpl.js
1310 sun/util/locale/provider/JRELocaleProviderAdapter.js
1311 sun/util/locale/provider/LocaleDataMetaInfo.js
1312 sun/util/locale/provider/LocaleProviderAdapter.js
1313 sun/util/locale/provider/LocaleResources.js
1314 sun/util/locale/provider/LocaleServiceProviderPool.js
1315 sun/util/locale/provider/ResourceBundleBasedAdapter.js
1316 sun/util/locale/provider/SPILocaleProviderAdapter.js
1317 sun/util/resources/LocaleData.js
1318 sun/util/resources/ParallelListResourceBundle.js
1319 sun/util/spi/CalendarProvider.js
1320 swingjs/JSApp.js
1321 swingjs/JSAppletThread.js
1322 swingjs/JSAppletViewer.js
1323 swingjs/JSDummyApplet.js
1324 swingjs/JSFocusPeer.js
1325 swingjs/JSFontMetrics.js
1326 swingjs/JSFrameViewer.js
1327 swingjs/JSGraphics2D.js
1328 swingjs/JSGraphicsCompositor.js
1329 swingjs/JSGraphicsConfiguration.js
1330 swingjs/JSGraphicsEnvironment.js
1331 swingjs/JSImage.js
1332 swingjs/JSImagekit.js
1333 swingjs/JSKeyEvent.js
1334 swingjs/JSMenuManager.js
1335 swingjs/JSMouse.js
1336 swingjs/JSScreenDevice.js
1337 swingjs/JSThreadGroup.js
1338 swingjs/JSToolkit.js
1339 swingjs/JSUtil.js
1340 swingjs/a2s/A2SContainer.js
1341 swingjs/a2s/Dialog.js
1342 swingjs/api/Interface.js
1343 swingjs/api/JSUtilI.js
1344 swingjs/api/js/DOMNode.js
1345 swingjs/api/js/HTML5Canvas.js
1346 swingjs/api/js/HTML5CanvasContext2D.js
1347 swingjs/api/js/JSFunction.js
1348 swingjs/api/js/JSInterface.js
1349 swingjs/jquery/JQueryUI.js
1350 swingjs/json/JSON.js
1351 swingjs/jzlib/Adler32.js
1352 swingjs/jzlib/CRC32.js
1353 swingjs/jzlib/Checksum.js
1354 swingjs/jzlib/InfBlocks.js
1355 swingjs/jzlib/InfCodes.js
1356 swingjs/jzlib/InfTree.js
1357 swingjs/jzlib/Inflate.js
1358 swingjs/jzlib/Inflater.js
1359 swingjs/jzlib/InflaterInputStream.js
1360 swingjs/jzlib/ZStream.js
1361 swingjs/plaf/BasicArrowButton.js
1362 swingjs/plaf/BasicComboBoxEditor.js
1363 swingjs/plaf/BasicComboBoxRenderer.js
1364 swingjs/plaf/BasicHTML.js
1365 swingjs/plaf/ButtonListener.js
1366 swingjs/plaf/CellHolder.js
1367 swingjs/plaf/DefaultMenuLayout.js
1368 swingjs/plaf/HTML5LookAndFeel.js
1369 swingjs/plaf/JSAppletUI.js
1370 swingjs/plaf/JSButtonUI.js
1371 swingjs/plaf/JSCheckBoxMenuItemUI.js
1372 swingjs/plaf/JSCheckBoxUI.js
1373 swingjs/plaf/JSComboBoxUI.js
1374 swingjs/plaf/JSComboPopupList.js
1375 swingjs/plaf/JSComponentUI.js
1376 swingjs/plaf/JSDesktopIconUI.js
1377 swingjs/plaf/JSDesktopPaneUI.js
1378 swingjs/plaf/JSDialogUI.js
1379 swingjs/plaf/JSEventHandler.js
1380 swingjs/plaf/JSFormattedTextFieldUI.js
1381 swingjs/plaf/JSFrameUI.js
1382 swingjs/plaf/JSGraphicsUtils.js
1383 swingjs/plaf/JSInternalFrameUI.js
1384 swingjs/plaf/JSLabelUI.js
1385 swingjs/plaf/JSLayeredPaneUI.js
1386 swingjs/plaf/JSLightweightUI.js
1387 swingjs/plaf/JSListUI.js
1388 swingjs/plaf/JSMenuBarUI.js
1389 swingjs/plaf/JSMenuItemUI.js
1390 swingjs/plaf/JSMenuUI.js
1391 swingjs/plaf/JSOptionPaneUI.js
1392 swingjs/plaf/JSPanelUI.js
1393 swingjs/plaf/JSPopupMenuSeparatorUI.js
1394 swingjs/plaf/JSPopupMenuUI.js
1395 swingjs/plaf/JSPopupUI.js
1396 swingjs/plaf/JSProgressBarUI.js
1397 swingjs/plaf/JSRadioButtonMenuItemUI.js
1398 swingjs/plaf/JSRadioButtonUI.js
1399 swingjs/plaf/JSRootPaneUI.js
1400 swingjs/plaf/JSScrollBarUI.js
1401 swingjs/plaf/JSScrollPaneUI.js
1402 swingjs/plaf/JSSeparatorUI.js
1403 swingjs/plaf/JSSliderUI.js
1404 swingjs/plaf/JSSpinnerUI.js
1405 swingjs/plaf/JSTabbedPaneUI.js
1406 swingjs/plaf/JSTableHeaderUI.js
1407 swingjs/plaf/JSTableUI.js
1408 swingjs/plaf/JSTextAreaUI.js
1409 swingjs/plaf/JSTextFieldUI.js
1410 swingjs/plaf/JSTextUI.js
1411 swingjs/plaf/JSToolTipUI.js
1412 swingjs/plaf/JSViewportUI.js
1413 swingjs/plaf/JSWindowUI.js
1414 swingjs/plaf/LazyActionMap.js
1415 swingjs/plaf/Resizer.js
1416 swingjs/plaf/TextListener.js
1417 swingjs/xml/JSJAXBClass.js
1418 swingjs/xml/JSJAXBContext.js
1419 swingjs/xml/JSJAXBContextFactory.js
1420 swingjs/xml/JSJAXBDatatypeFactory.js
1421 swingjs/xml/JSJAXBField.js
1422 swingjs/xml/JSJAXBUnmarshaller.js
1423 swingjs/xml/JSSAXAttributes.js
1424 swingjs/xml/JSSAXParser.js
1425 swingjs/xml/JSXMLGregorianCalendarImpl.js
1426 swingjs/xml/JSXMLInputFactory.js
1427 swingjs/xml/JSXMLStreamReader.js
1428 uk/ac/dundee/compbio/slivkaclient/Job.js
1429 uk/ac/dundee/compbio/slivkaclient/JobRequest.js
1430 uk/ac/dundee/compbio/slivkaclient/Parameter.js
1431 uk/ac/dundee/compbio/slivkaclient/RemoteFile.js
1432 uk/ac/dundee/compbio/slivkaclient/SlivkaClient.js
1433 uk/ac/dundee/compbio/slivkaclient/SlivkaService.js