Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / appletgui / TreeCanvas.java
2023-05-22 James ProcterJAL-1551 spotless
2023-05-19 James ProcterJAL-1551 spotlessApply
2023-05-19 James ProcterJAL-1551 spotlessApply
2023-02-23 James ProcterJAL-4134 - brutal hack to build a tree clustering colum...
2023-02-23 James ProcterJAL-4134 - refactor tree calculation code to work with...
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0
2018-10-09 Jim ProcterJAL-3127 pass reference to AlignViewportI when creating...
2017-10-03 gmungocJAL-2738 copy to spikes/mungo
2017-08-16 Jim ProcterJAL-2418 source formatting
2017-06-09 gmungocJAL-2446 merged to spike branch
2017-06-05 Jim ProcterJAL-2590 patch for rendering eggnog trees with polytomi...
2017-03-06 gmungocJAL-2428 separate TreeModel from TreeBuilder/NJTree...
2017-02-23 gmungocJAL-2403 JAL-1483 changes to ScoreModelI hierarchy...
2017-01-31 gmungocJAL-2371 rename global/viewportColourScheme to residueS...
2017-01-04 gmungocJAL-2371 CollectionColourScheme wraps ColourSchemeI
2016-12-16 gmungocJAL-2360 getColour() renamed to getColourScheme(),...
2016-12-16 gmungocJAL-2360 refactoring for JalviewColourScheme enum,
2016-11-02 gmungocJAL-98 JAL-1854 encapsulate 'magic number' threshold...
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-10-05 Jim ProcterJAL-2189 source formatting
2016-09-22 gmungocJAL-1421 typed ResidueProperties.propHash; JAL-2176...
2016-09-01 gmungocJAL-1421 add generics to NJTree, refactor recursive...
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-04-08 gmungocJAL-1691 applet SplitFrame scrolling; pull up of 5...
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2
2014-05-22 Jim ProcterJAL-1503 update version in GPL header
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2013-10-07 Jim ProcterJAL-1385 JAL-535 refactor sequence colour settings...
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2012-05-31 jprocterformatting
2012-05-30 jprocterJAL-1114 - refactor methods handling Vectors and Hashta...
2011-10-27 jprocter(JAL-969) refactored alignmentViewport base class to...
2011-10-21 jprocterRefactored alignment viewport to use common base, exten...
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-09-27 jprocterapply version 2.7 copyright
2011-07-22 jprocterfix NPE when annotation colourgradient is applied
2011-02-04 jproctergroup associated annotation and logos JAL-516 JAL-759
2011-01-12 jprocterjavascript callback for selection, mousover, and functi...
2010-09-23 jprocterapply jalview code style
2010-09-23 jprocterJalview 2.6 source licence
2010-04-30 jprocterjalview 2.5 release banner
2010-04-23 jprocterfix for bug #62456
2009-06-08 jprocterapply gpl development license
2008-09-04 jproctermerge from 2_4_Release branch
2008-07-18 jprocterSequence label colour stored for each sequence group
2007-10-27 jprocterfixed bootstrap value rendering to occur only when...
2007-09-06 jprocterfixes bootstrap bug noted by Chunlong Chen in email...
2007-02-07 amwaterhouseFormatting
2007-01-31 amwaterhouseUnique name for new group and treegroup
2007-01-23 amwaterhouseHidden representatives moved from sequence to viewport
2007-01-17 amwaterhouseFit to Window bug fixed
2006-11-14 amwaterhouseCommands, history, consensus, refresh updated
2006-11-13 amwaterhouseColours in viewport
2006-09-18 amwaterhouseclick node to select sequences
2006-08-21 amwaterhouseheader updated
2006-07-12 amwaterhousesequences are private in SequenceGroup
2005-12-06 amwaterhouseafter merge
2005-09-30 amwaterhouseRemove redundancy in Eclipse
2005-09-28 amwaterhouseWrap alignment with annotations
2005-09-20 amwaterhouseFormat label left align
2005-09-08 amwaterhouseLoad in a thread
2005-08-30 amwaterhouseSet user colours same as global
2005-08-24 amwaterhouseSet new group width-1
2005-08-23 amwaterhouseEnd res of selection group corrected
2005-08-22 amwaterhouseCheck for null colour
2005-08-22 amwaterhouseConservation colour scheme is no more
2005-06-16 amwaterhousedont add sequence twice to new group
2005-06-13 amwaterhousePaintRefresh changed
2005-06-08 amwaterhouserecalc group conserve
2005-06-08 amwaterhouseFormatted source
2005-06-08 amwaterhouseGPL license added
2005-05-20 jprocteradded tree node property for sequence placeholders.
2005-05-04 amwaterhouseApplet files