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Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / bin / JalviewLite.java
2023-11-03 James ProcterJAL-4090 JAL-1551 spotlessApply commit | commitdiff
2023-08-10 Ben SoaresJAL-629 Change all stdout and stderr output to use... commit | commitdiff
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 commit | commitdiff
2021-09-21 Ben SoaresJAL-3691 automatic insertion of Locale.ROOT to toUpperC... commit | commitdiff
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge commit | commitdiff
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat... commit | commitdiff
2018-08-21 hansonrmc_view references were MCview commit | commitdiff
2018-01-15 kiramtJAL-2759 Refactor of hideInsertionsFor after review commit | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo commit | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting commit | commitdiff
2017-06-09 gmungocJAL-2446 merged to spike branch commit | commitdiff
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection... commit | commitdiff
2017-01-17 gmungocMerge branch 'develop' into features/JAL-2360colourSche... commit | commitdiff
2017-01-11 gmungocJAL-2344 FileFormats singleton for formats, FileFormatI... commit | commitdiff
2017-01-05 gmungocMerge branch 'develop' into features/JAL-2360colourSche... commit | commitdiff
2016-12-16 gmungocJAL-2360 refactoring for JalviewColourScheme enum, commit | commitdiff
2016-12-14 Jim ProcterMerge branch 'patch/JAL-2197_jpredforjnets' into develop commit | commitdiff
2016-11-25 gmungocMerge branch 'develop' into trialMerge commit | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch commit | commitdiff
2016-10-24 Jim ProcterJAL-2197 add jpredfile as alternative form of jnetfile... commit | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... commit | commitdiff
2016-09-19 gmungocJAL-2172 test and code updates for readonly selection... commit | commitdiff
2016-08-30 gmungocMerge branch 'develop' into features/filetypeEnum commit | commitdiff
2016-08-18 gmungocJAL-2001 return copy of selection in getSelected() commit | commitdiff
2016-07-12 gmungocFileFormat enum wip changes commit | commitdiff
2016-07-11 gmungocfile format enum wip changes commit | commitdiff
2016-04-04 Jim ProcterJAL-1551 formatting commit | commitdiff
2016-04-04 Jim ProcterJAL-2001 - note about possible side effect on JalviewLi... commit | commitdiff
2015-11-21 gmungocJAL-653 JAL-1968 FeaturesFile now handles Jalview or... commit | commitdiff
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 commit | commitdiff
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright commit | commitdiff
2015-10-08 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch commit | commitdiff
2015-10-07 Jim ProcterJAL-1894 source formatting commit | commitdiff
2015-09-22 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch commit | commitdiff
2015-09-22 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch commit | commitdiff
2015-09-18 gmungocJAL-1859 reinstated full path to file option (for local... commit | commitdiff
2015-09-16 gmungocJAL-1859 refactor duplicated code to new HttpUtils... commit | commitdiff
2015-09-16 gmungocJAL-1859 code tidy, remove 'absolute URL' option commit | commitdiff
2015-09-16 gmungocJAL-1859 refactor addProtocol, setProtocolState as... commit | commitdiff
2015-09-15 gmungocJAL-1859 strip file name from applet documentbase commit | commitdiff
2015-09-15 gmungocJAL-1859 refactoring / debugging added commit | commitdiff
2015-09-14 gmungocJAL-1684 align added alignment to match original in... commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports commit | commitdiff
2015-09-09 gmungocJAL-857 added debug output to track down document base... commit | commitdiff
2015-09-08 Jim ProcterJAL-1695 make enableSplitFrame applet parameter true... commit | commitdiff
2015-09-07 Jim ProcterJAL-1522 make installation default 'applet' for the... commit | commitdiff
2015-08-24 gmungocJAL-845 error message on syserr if supplied files don... commit | commitdiff
2015-07-10 tcofoegbuJAL-1759 code fix to enable testng ant task compile... commit | commitdiff
2015-06-22 Jim ProcterJAL-1780 JAL-653 Format/AppletFormat import and export... commit | commitdiff
2015-06-22 Jim ProcterJAL-653 JAL-1780 reorder imports commit | commitdiff
2015-04-28 gmungocJAL-1684 removed reflection from ViewStyle (to Junit... commit | commitdiff
2015-04-13 gmungocJAL-1695 parameter controls whether SplitFrame is enabled commit | commitdiff
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch commit | commitdiff
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... commit | commitdiff
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... commit | commitdiff
2015-02-19 gmungocJAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor commit | commitdiff
2015-01-28 Jim ProcterJAL-1565 automatically mark query sequence as the seque... commit | commitdiff
2015-01-18 Jim ProcterJAL-1628 employ new AnnotationFile reader method to... commit | commitdiff
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7 commit | commitdiff
2014-12-15 Jim ProcterJAL-1620 version bump and release notes commit | commitdiff
2014-11-19 Charles OfoegbuJAL-1522 included installation details in log output commit | commitdiff
2014-11-14 Jim ProcterMerge branch 'develop' into JAL-1483_featureBasedTreeCalc commit | commitdiff
2014-10-30 Jim ProcterJAL-674 register PDB IDs when ever they are resolved... commit | commitdiff
2014-10-30 Jim ProcterJAL-1551 format and tidy commit | commitdiff
2014-09-23 darolmarJAL-1355 commit | commitdiff
2014-08-08 j.procter@dundee... JAL-1483 move show sequence feature and sequence featur... commit | commitdiff
2014-06-06 Jim ProcterJAL-1517 source formatting commit | commitdiff
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 commit | commitdiff
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 commit | commitdiff
2014-05-28 Jim ProcterJAL-1507 bugfix commit | commitdiff
2014-05-27 Jim ProcterJAL-1507 added loop to throw dummy javascript calls... commit | commitdiff
2014-05-22 Jim ProcterJAL-1503 update version in GPL header commit | commitdiff
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge commit | commitdiff
2014-01-29 Jim ProcterJAL-1432 updated copyright notices commit | commitdiff
2013-08-29 darolmari18n commit | commitdiff
2013-08-14 Jim ProcterJAL-1354 replacement of bare strings in GUI dialogs... commit | commitdiff
2013-05-13 Jim ProcterJAL-1289 call oninit callback even if no alignment... commit | commitdiff
2012-10-22 jprocterJalview 2.8 Source Header commit | commitdiff
2012-10-03 jprocterformatting commit | commitdiff
2012-05-23 jprocterJAL-1078 - extend applet cut'n'paste features/annotatio... commit | commitdiff
2012-05-23 jprocterJAL-1067, JAL-1105 - refactor parser to fit Jalview... commit | commitdiff
2012-05-22 jprocterMerge remote-tracking branch 'origin/Tcoffee_JAL-1065... commit | commitdiff
2011-10-27 jprocter(JAL-969) todo test re refactoring and possible change... commit | commitdiff
2011-10-21 jprocterMerge branch 'Release_2_7_Branch_hotfix_JAL-962' into... commit | commitdiff
2011-10-21 jprocter(JAL-965) new api methods to allow features to be loade... commit | commitdiff
2011-10-21 jprocter(JAL-962) rejig parameter processing order so groups... commit | commitdiff
2011-10-10 jprocterupdate author list in license for (JAL-826) commit | commitdiff
2011-09-27 jprocterapply version 2.7 copyright commit | commitdiff
2011-09-12 jprocterJAL-927 ensure api method calls that affect GUI state... commit | commitdiff
2011-08-15 jprocterJAL-904 added scrollToRow and scrollToColumn methods... commit | commitdiff
2011-08-03 jprocterrefactored resolvetocodebase code and reused for resour... commit | commitdiff
2011-08-03 jprocterrefactored resolvetocodebase code and reused for resour... commit | commitdiff
2011-07-28 jprocteradded 'since 2.x notes to parameters'. User configurabl... commit | commitdiff
2011-07-22 jprocterdefault parameter for colours in annotation shading... commit | commitdiff
2011-07-03 jprocterextracted jalviewlite API calls as separate interface... commit | commitdiff
2011-05-17 jprocterrefactor to allow distinct StructureSelectionManager... commit | commitdiff
2011-05-05 jprocterimproved javascript callback execution thread and provi... commit | commitdiff
2011-02-14 jprocterJAL-621 - also renamed list of javascript handlers commit | commitdiff
2011-01-21 jprocterextended mouseover message with absolute sequence posit... commit | commitdiff
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