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JAL-3759 exclude hidden columns when processing column selection
[jalview.git] / src / jalview / controller / AlignViewController.java
2020-10-29 Jim Procter JAL-3759 exclude hidden columns when processing... blob | commitdiff
2020-03-20 Jim ProcterJAL-3549 javadoc blob | commitdiff | diff to current
2020-03-09 gmungocJAL-3549 JAL-3305 no Sort By Score / Density if no... blob | commitdiff | diff to current
2019-04-20 gmungocJAL-2791 tailored message if find fails on selection... blob | commitdiff | diff to current
2018-11-19 Jim ProcterJAL-3127 drop redundant hidden representative sequences... blob | commitdiff | diff to current
2018-10-16 Jim ProcterJAL-3127 use AlignViewportI.addGroup to create & propag... blob | commitdiff | diff to current
2018-01-10 gmungocJAL-1793 update spike branch to latest blob | commitdiff | diff to current
2017-12-08 gmungocJAL-2843 read/write feature filters from/to Jalview... blob | commitdiff | diff to current
2017-11-02 gmungocJAL-2808 spike updated with latest blob | commitdiff | diff to current
2017-11-02 gmungocJAL-2808 refactored getColor() checks feature visibility blob | commitdiff | diff to current
2017-10-31 gmungocMerge branch 'bug/JAL-2791selectVisibleFeatures' into blob | commitdiff | diff to current
2017-10-31 gmungocJAL-2791 select columns by _visible_ features blob | commitdiff | diff to current
2017-10-30 gmungocJAL-2791 check feature visibility when selecting columns blob | commitdiff | diff to current
2017-10-27 gmungocJAL-1793 spike branch updated to latest blob | commitdiff | diff to current
2017-10-26 Jim ProcterMerge branch 'feature/JAL-2488finalize' into develop blob | commitdiff | diff to current
2017-10-24 gmungocJAL-2738 update spike branch with latest blob | commitdiff | diff to current
2017-10-12 Jim ProcterJAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview blob | commitdiff | diff to current
2017-10-03 gmungocJAL-2738 copy to spikes/mungo blob | commitdiff | diff to current
2017-09-01 gmungocJAL-2488 remove finalize methods blob | commitdiff | diff to current
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList blob | commitdiff | diff to current
2017-08-16 Jim ProcterJAL-2418 source formatting blob | commitdiff | diff to current
2017-06-09 gmungocJAL-2446 merged to spike branch blob | commitdiff | diff to current
2017-06-01 gmungocJAL-2754 Sequence.findFeatures(fromCol, toCol) features/JAL-2754findFeaturesByColumn blob | commitdiff | diff to current
2017-05-31 gmungocJAL-2574 preparation for Sequence.findFeatures(col1... blob | commitdiff | diff to current
2017-05-19 gmungocJAL-2490 only count sequences where feature overlap... blob | commitdiff | diff to current
2017-05-15 gmungocJAL-2490 use findFeatures() for efficient feature overl... blob | commitdiff | diff to current
2016-11-25 gmungocMerge branch 'develop' into trialMerge blob | commitdiff | diff to current
2016-11-23 Jim ProcterMerge branch 'bug/JAL-2323disulfideOverview' into develop blob | commitdiff | diff to current
2016-11-21 gmungocJAL-2333 corrected select columns with 'contact' feature blob | commitdiff | diff to current
2016-10-30 Jim ProcterJAL-1738 JAL-345 new controller method based on mark... blob | commitdiff | diff to current
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch blob | commitdiff | diff to current
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... blob | commitdiff | diff to current
2016-08-30 gmungocMerge branch 'develop' into features/filetypeEnum blob | commitdiff | diff to current
2016-08-24 gmungocJAL-1424 recode calls to MessageManager to allow code... blob | commitdiff | diff to current
2016-08-23 gmungocJAL-2174 markColumns() refactored inside ColumnSelection blob | commitdiff | diff to current
2016-08-19 gmungocJAL-2174 bug fixes + refactoring to allow + unit tests blob | commitdiff | diff to current
2016-08-18 gmungocJAL-1445 status message '...not containing...' for... blob | commitdiff | diff to current
2016-07-12 gmungocFileFormat enum wip changes blob | commitdiff | diff to current
2016-05-03 gmungocJAL-2050 hide introns also when fetching Ensembl xrefs... blob | commitdiff | diff to current
2016-02-12 gmungocJAL-2008 avoid unnecessary repaints; signatures changed... blob | commitdiff | diff to current
2016-02-04 gmungocMerge branch 'develop' into features/JAL-653_JAL-1766_h... blob | commitdiff | diff to current
2016-02-04 gmungocJAL-599 bug fixed so array of visible types is populated blob | commitdiff | diff to current
2016-01-28 gmungocMerge branch 'develop' into JAL-1705_trialMerge blob | commitdiff | diff to current
2016-01-11 gmungocJAL-1989 more unit tests and encapsulation for ColumnSe... blob | commitdiff | diff to current
2015-11-21 gmungocJAL-653 JAL-1968 FeaturesFile now handles Jalview or... blob | commitdiff | diff to current
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 blob | commitdiff | diff to current
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright blob | commitdiff | diff to current
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... blob | commitdiff | diff to current
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports blob | commitdiff | diff to current
2015-06-05 Jim ProcterJAL-1482 JAL-653 refactor feature file import code... blob | commitdiff | diff to current
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch blob | commitdiff | diff to current
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... blob | commitdiff | diff to current
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... blob | commitdiff | diff to current
2015-02-19 gmungocJAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor blob | commitdiff | diff to current
2015-02-12 Jim ProcterJAL-1350 pass the columnselection rather then selected... blob | commitdiff | diff to current
2015-01-22 Charles OfoegbuJAL-1553 added applet support for the select-column... blob | commitdiff | diff to current
2015-01-20 Charles OfoegbuFurther abstractions and clean up blob | commitdiff | diff to current
2014-12-15 Jim ProcterJAL-1620 version bump and release notes blob | commitdiff | diff to current
2014-11-14 Jim ProcterMerge branch 'develop' into JAL-1483_featureBasedTreeCalc blob | commitdiff | diff to current
2014-09-23 darolmarJAL-1355 blob | commitdiff | diff to current
2014-08-08 j.procter@dundee... tidy imports blob | commitdiff | diff to current
2014-08-08 j.procter@dundee... JAL-1483 sort by feature score/density made first class... blob | commitdiff | diff to current
2014-06-06 Jim ProcterJAL-1517 source formatting blob | commitdiff | diff to current
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 blob | commitdiff | diff to current
2014-05-23 Jim ProcterJAL-1445 extend functionality to select or toggle selec... blob | commitdiff | diff to current
2014-02-17 Jim ProcterJAL-1445 ported routine for selecting containing/non... blob | commitdiff | diff to current
2014-02-17 Jim ProcterJAL-535 interface for GUI state update methods that... blob | commitdiff | diff to current
2013-10-07 Jim ProcterJAL-1385 Alignment view controller logic implementation... blob | commitdiff | diff to current