git://source.jalview.org / jalview.git / history
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / io / AppletFormatAdapter.java
2023-11-03 James ProcterJAL-4090 JAL-1551 spotlessApply commit | commitdiff
2023-08-10 Ben SoaresJAL-629 Change all stdout and stderr output to use... commit | commitdiff
2023-03-02 Ben SoaresJAL-629 Removal of unnecessary methods. Set pLTTD tempf... commit | commitdiff
2023-01-24 James ProcterJAL-629 need to delay call to AlignFile.parse() if... commit | commitdiff
2023-01-11 Ben SoaresJAL-629 refactoring TFType. Remove i18n identification... commit | commitdiff
2022-12-05 Ben SoaresJAL-629 implementation of --tempfac options commit | commitdiff
2022-06-10 Jim ProcterMerge branch 'features/r2_11_2_alphafold/JAL-2349_JAL... commit | commitdiff
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 commit | commitdiff
2022-02-16 Jim ProcterMerge branch 'develop' into features/r2_11_2_alphafold... commit | commitdiff
2021-09-21 Ben SoaresJAL-3691 automatic insertion of Locale.ROOT to toUpperC... commit | commitdiff
2021-08-11 Jim ProcterJAL-2349 remove test code commit | commitdiff
2021-08-11 Jim ProcterMerge branch 'features/JAL-2349_matrixvis' into feature... commit | commitdiff
2019-06-18 Jim ProcterMerge branch 'features/JAL-2349_matrixvis' into merge... commit | commitdiff
2019-04-04 gmungocJAL-3220 j2sIgnore on main methods on test / utility... commit | commitdiff
2019-01-26 hansonrJalview.isJS() --> Platform.isJS(), DBRefEntry[] -... commit | commitdiff
2018-08-21 hansonrmc_view references were MCview commit | commitdiff
2018-07-23 gmungocJAL-3056 suppress menu options, and repoint Help, for... commit | commitdiff
2018-07-20 gmungocJAL-3048 revised AlignExportSettings dialog with respon... commit | commitdiff
2018-06-28 hansonrJAL-3032 DND enabled; additional io changes for File... commit | commitdiff
2018-06-27 hansonrJAL-3032 part2 local file reading by JFileChooser commit | commitdiff
2018-06-23 hansonrJAL-3026 JDesktop/JInternalFrames support + relative... commit | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo commit | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting commit | commitdiff
2017-06-09 gmungocJAL-2446 merged to spike branch commit | commitdiff
2017-06-09 Jim ProcterMerge branch 'develop' into features/JAL-2349_matrixvis commit | commitdiff
2017-05-31 tcofoegbuFixed failing tests commit | commitdiff
2017-02-10 Jim ProcterMerge branch 'develop' into spike/matrix_annot commit | commitdiff
2017-01-17 Jim ProcterJAL-2349 rename ContactMatrixTest to SeqDistanceContact... commit | commitdiff
2017-01-11 gmungocJAL-2344 separated AlignmentFileI into AlignmentFileRea... commit | commitdiff
2017-01-11 gmungocJAL-2344 FileFormats singleton for formats, FileFormatI... commit | commitdiff
2016-12-04 Jim ProcterJAL-2349 add dummy contact for both applet and application commit | commitdiff
2016-11-28 gmungocJAL-2344 added FileFormatI.isStructureFile() commit | commitdiff
2016-11-25 gmungocMerge branch 'develop' into trialMerge commit | commitdiff
2016-11-25 gmungocJAL-2344 use .equals() to compare FileFormatI objects commit | commitdiff
2016-11-24 gmungocFurther tweaks to get tests passing commit | commitdiff
2016-11-24 gmungocFileFormatI further tweaks, clean compile commit | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch commit | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... commit | commitdiff
2016-09-23 tcofoegbuJAL-2164 JAL-1919 fixed failed revert commit commit | commitdiff
2016-09-16 gmungocJAL-2164 removed unused parameters from JmolParser... commit | commitdiff
2016-09-13 tcofoegbuRevert "JAL-2164 JAL-1919 disabled and removed PDB... commit | commitdiff
2016-09-13 tcofoegbuJAL-2164 JAL-1919 disabled and removed PDB file parser... commit | commitdiff
2016-08-30 gmungocMerge branch 'develop' into features/filetypeEnum commit | commitdiff
2016-07-26 tcofoegbuJAL-2157 bugfix for issues from enum refactoring commit | commitdiff
2016-07-25 tcofoegbuJAL-2157 bugfix for regression from commit 82a6c8e2e25b... commit | commitdiff
2016-07-21 Jim ProcterMerge branch 'apifix/JAL-1926_JAL-2106' into develop commit | commitdiff
2016-07-19 tcofoegbuJAL-1919 set default structure file format to mmCIF... commit | commitdiff
2016-07-18 gmungocfileFormat enum wip changes commit | commitdiff
2016-07-11 gmungocfile format enum wip changes commit | commitdiff
2016-07-08 tcofoegbuJAL-1919 Fixed failing tests, enabled HETATM processing... commit | commitdiff
2016-06-30 tcofoegbuJAL-1919 updated PDBSequenceFetcherTest and JMol parser... commit | commitdiff
2016-04-14 gmungocJAL-1270 JAL-653 use 'parse immediately' FeaturesFile... commit | commitdiff
2016-03-21 tcofoegbudevelop merge commit | commitdiff
2016-03-15 tcofoegbuJAL-1919 refined structure view annotation settings... commit | commitdiff
2016-02-25 tcofoegbuJAL-1919 initial support for mmCIF using JMol API.... commit | commitdiff
2016-01-21 tcofoegbuJAL-1919 basic support for importing and viewing mmCIF... commit | commitdiff
2015-11-21 gmungocJAL-653 JAL-1968 FeaturesFile now handles Jalview or... commit | commitdiff
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 commit | commitdiff
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports commit | commitdiff
2015-08-18 tcofoegbuJAL-1835 made BioJSON embedding to html exports configu... commit | commitdiff
2015-07-21 tcofoegbuJAL-1443 bugfix to prevent loading of unidentifiable... commit | commitdiff
2015-06-30 tcofoegbuJAL-1641 round trip test/refactoring commit | commitdiff
2015-06-26 tcofoegbuJAL-1641 fixed broken functionalities after refactor commit | commitdiff
2015-06-24 Jim ProcterJAL-653 JAL-1780 JAL-1892 fix jalviewLite compilation commit | commitdiff
2015-06-22 Jim ProcterJAL-1780 JAL-653 Format/AppletFormat import and export... commit | commitdiff
2015-06-19 Jim ProcterJAL-653 JAL-1780 refactor getGroups so HTMLfile/JSONfil... commit | commitdiff
2015-06-19 Jim ProcterJAL-1780 JAL-653 organise imports commit | commitdiff
2015-06-17 Jim ProcterMerge branch 'develop' into features/JAL-653_gffalignments features/JAL-653_gffalignments commit | commitdiff
2015-06-12 tcofoegbuJAL-1641 refactor commit | commitdiff
2015-06-07 Jim ProcterJAL-653 GFF recognition for identifyFile and format... commit | commitdiff
2015-06-05 tcofoegbuJAL-1760 JAL-1641 Serialisation of Hidden Seqs and... commit | commitdiff
2015-05-19 tcofoegbuJAL-1641 Further refactoring of JSON export option... commit | commitdiff
2015-05-13 tcofoegbuFixed some broken tests commit | commitdiff
2015-05-12 tcofoegbuJAL_793 implemented embeding source data in exported... commit | commitdiff
2015-05-11 tcofoegbuJAL-1641 cherry-picked changes into develop compatible... commit | commitdiff
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch commit | commitdiff
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... commit | commitdiff
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... commit | commitdiff
2015-01-14 gmungocJAL-1629 .jar option removed from Alignment File Save... commit | commitdiff
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7 commit | commitdiff
2014-12-15 Jim ProcterJAL-1620 version bump and release notes commit | commitdiff
2014-11-18 Jim ProcterMerge branch 'JAL-1587_promotedisorder' into develop commit | commitdiff
2014-11-18 Jim ProcterJAL-674 make temperature factor, local secondary struct... commit | commitdiff
2014-11-12 Charles OfoegbuExcluded HtmlFile.java dependencies from AppletFomatAdapter commit | commitdiff
2014-11-06 Charles OfoegbuUpdated BioJs Html to be capable of launching jalivew commit | commitdiff
2014-10-15 Jim ProcterJAL-674 always try to extract secondary structure when... commit | commitdiff
2014-10-06 Jim ProcterMerge branch 'Release_2_8_2_Branch' into JAL-429_phylip... commit | commitdiff
2014-10-03 Charles OfoegbuIntegration of David Corsars Phylip File support commit | commitdiff
2014-09-26 darolmarJAL-1355 commit | commitdiff
2014-09-23 darolmarJAL-1355 commit | commitdiff
2014-09-12 j.procter@dundee... JAL-1486 JAL-1543 pushed alignment viewport->view-... commit | commitdiff
2014-09-12 j.procter@dundee... JAL-1199 add stockholm output to list of AppletFormatAd... commit | commitdiff
2014-06-06 Jim ProcterJAL-1517 source formatting commit | commitdiff
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 commit | commitdiff
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 commit | commitdiff
2014-06-05 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_2_Branch commit | commitdiff
2014-06-03 Jim ProcterJAL-690 add .jvp as default jalview project filetype commit | commitdiff
2014-05-22 Jim ProcterJAL-1503 update version in GPL header commit | commitdiff
next