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Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / io / vamsas / Tree.java
2023-11-03 James ProcterJAL-4090 JAL-1551 spotlessApply commit | commitdiff
2023-08-10 Ben SoaresJAL-629 Change all stdout and stderr output to use... commit | commitdiff
2023-05-22 James ProcterJAL-1551 spotless commit | commitdiff
2023-05-19 James ProcterJAL-1551 spotlessApply commit | commitdiff
2023-05-19 James ProcterJAL-1551 spotlessApply commit | commitdiff
2023-05-18 James ProcterJAL-4134 properly specify BinaryNode as a typed generic... commit | commitdiff
2023-02-23 James ProcterJAL-4134 - brutal hack to build a tree clustering colum... commit | commitdiff
2023-02-23 James ProcterJAL-4134 - refactor tree calculation code to work with... commit | commitdiff
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 commit | commitdiff
2022-02-11 Jim ProcterJAL-3949 - refactor logging from jalview.bin.Cache... commit | commitdiff
2022-02-11 Ben SoaresJAL-3949 Complete new abstracted logging framework... commit | commitdiff
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge commit | commitdiff
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat... commit | commitdiff
2018-06-22 gmungocJAL-3032 avoid assignments on the same line as synchronized commit | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo commit | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting commit | commitdiff
2017-06-09 gmungocJAL-2446 merged to spike branch commit | commitdiff
2017-03-24 gmungocJAL-2428 simplify TreeModel constructors, add getOrigin... commit | commitdiff
2017-03-24 gmungocJAL-1632 TreeChooser renamed CalculationChooser, text... commit | commitdiff
2017-03-06 gmungocJAL-2428 separate TreeModel from TreeBuilder/NJTree... commit | commitdiff
2017-02-17 gmungocJAL-2403 constants for "NJ", "AV" commit | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch commit | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... commit | commitdiff
2016-09-01 gmungocJAL-1421 add generics to NJTree, refactor recursive... commit | commitdiff
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 commit | commitdiff
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports commit | commitdiff
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch commit | commitdiff
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... commit | commitdiff
2014-12-15 Jim ProcterJAL-1620 version bump and release notes commit | commitdiff
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 commit | commitdiff
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 commit | commitdiff
2014-05-22 Jim ProcterJAL-1503 update version in GPL header commit | commitdiff
2014-01-29 Jim ProcterJAL-1432 updated copyright notices commit | commitdiff
2012-10-22 jprocterJalview 2.8 Source Header commit | commitdiff
2012-10-03 jprocterformatting commit | commitdiff
2012-06-13 jprocterjavatidy commit | commitdiff
2012-06-12 jprocterJAL-1115 refactor base collection for Alignment from... commit | commitdiff
2011-10-10 jprocterupdate author list in license for (JAL-826) commit | commitdiff
2011-09-27 jprocterapply version 2.7 copyright commit | commitdiff
2010-09-23 jprocterapply jalview code style commit | commitdiff
2010-09-23 jprocterJalview 2.6 source licence commit | commitdiff
2010-04-30 jprocterjalview 2.5 release banner commit | commitdiff
2009-06-08 jprocterapply gpl development license commit | commitdiff
2008-11-12 jprocterrefactored to propery separate addToDocument,addFromDoc... commit | commitdiff
2008-09-04 jproctermerge from 2_4_Release branch commit | commitdiff
2007-12-21 jprocterbugfixes commit | commitdiff
2007-10-24 jprocternull pointer exception and warning for update of tree commit | commitdiff
2007-09-28 jprocterbetter support for TreeNode binding commit | commitdiff
2007-09-25 jprocterascii file commit | commitdiff
2007-08-30 jprocterimproved vamsas treenode node binding support commit | commitdiff
2007-08-23 jprocterproper vamsas style binding of alignment sequence objec... commit | commitdiff
2007-07-25 jprocterbetter vamsas tree io (for when there are no nodemappings) commit | commitdiff
2007-07-13 jprocterrefactored form of vamsas document interaction code commit | commitdiff
2007-06-17 jproctervamsas-client-1.2 schema (mappings and Treenodes) and... commit | commitdiff