| 2020-12-11 |
Mateusz | JAL-3690 Let's enable web services (seriously this... |
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| 2020-05-18 |
Jim Procter | Merge branch 'alpha/JAL-3362_Jalview_212_alpha' into... |
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| 2019-07-16 |
gmungoc | JAL-3210 Merge branch 'develop' into trialMerge |
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| 2019-07-12 |
Thomas | JAL-2629 add sort by evalue and bit score |
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| 2019-07-03 |
tva | JAL-2629 can now filter by sequence e-value or bit... |
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| 2019-07-02 |
tva | JAL-2629 add simple jackhmmer functionality |
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| 2019-06-04 |
Jim Procter | Merge branch 'develop' into developtomchmmer |
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| 2019-04-15 |
Ben Soares | JAL-3130 Helper classes to take Class Exceptions when... |
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| 2019-04-03 |
hansonr | j2sNative clean-up. Fixes problem with second try of... |
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| 2019-03-31 |
hansonr | adds AlignFrame name jalview-alignment; |
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| 2019-03-27 |
hansonr | allows web-page embedding |
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| 2019-03-20 |
Ben Soares | JAL-3130 Lots of deprecation fixes. See utils/deprecat... |
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| 2019-03-13 |
gmungoc | Merge branch 'develop' into trialMerge |
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| 2019-03-07 |
gmungoc | Merge branch 'feature/JAL-3180colourAnnotationMenu... |
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| 2019-03-05 |
gmungoc | Merge remote-tracking branch 'origin/features/JAL-2620a... |
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| 2019-02-05 |
gmungoc | JAL-3048 JS-compatible confirm dialog on delete all |
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| 2019-01-30 |
gmungoc | JAL-3056 no export as BioJS in JalviewJS |
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| 2019-01-26 |
hansonr | Jalview.isJS() --> Platform.isJS(), DBRefEntry[] -... |
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| 2019-01-21 |
hansonr | added Platform settings separating mouse use of win... |
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| 2019-01-21 |
hansonr | added Platform settings separating mouse use of win... |
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| 2019-01-21 |
hansonr | isAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA... |
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| 2019-01-04 |
gmungoc | JAL-3180 fix By Annotation selection state in colour... |
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| 2018-10-29 |
gmungoc | JAL-3144 SequenceFetcher without JDatabaseTree |
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| 2018-10-04 |
gmungoc | JAL-3132 set status message when over sequence id or... |
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| 2018-09-11 |
gmungoc | JAL-3056 offer New / Expand / Gather View in JalviewJS |
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| 2018-08-20 |
gmungoc | JAL-3032 Feature Settings menu item always enabled... |
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| 2018-08-17 |
gmungoc | JAL-3048 remove obsolete way of handling dialogs in... |
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| 2018-07-25 |
hansonr | merged |
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| 2018-07-23 |
gmungoc | JAL-3056 suppress menu options, and repoint Help, for... |
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| 2018-07-20 |
gmungoc | JAL-3048 revised AlignExportSettings dialog with respon... |
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| 2018-07-19 |
gmungoc | JAL-3048 revert saveAs action so it works in Javascript too |
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| 2018-07-06 |
hansonr | JAL-3026 all tabbed panes use JavaScript option |
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| 2018-07-02 |
hansonr | JAL-3026 Java+JavaScript fix for GD#95 |
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| 2018-07-02 |
hansonr | JAL-3026 Java+JavaScript fix for GD#95 |
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| 2018-06-28 |
Jim Procter | JAL-3048 todo and JAL-3026 disable VCF support |
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| 2018-05-30 |
gmungoc | JAL-2629 suppress 'Add Database' menu option in favour... |
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| 2018-05-22 |
gmungoc | JAL-2629 method refactor and menu tidying |
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| 2018-03-30 |
gmungoc | JAL-2629 combine with/without defaults in one method... |
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| 2018-03-26 |
gmungoc | JAL-2939 unused action handler methods removed |
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| 2018-03-16 |
gmungoc | JAL-2620 alternative genetic code translation tables |
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| 2018-02-20 |
gmungoc | Merge branch 'develop' into features/mchmmer |
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| 2018-02-19 |
gmungoc | JAL-2629 refactoring of Hmmer preferences |
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| 2017-10-03 |
gmungoc | JAL-2738 copy to spikes/mungo |
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| 2017-09-21 |
gmungoc | JAL-2738 PoC of Load VCF file on to gene sequence |
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| 2017-08-25 |
TZVanaalten | JAL-2629 add ability to add and select a DB for hmmsearch |
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| 2017-08-25 |
TZVanaalten | JAL-2629 add basic parameter adjustment to hmmsearch... |
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| 2017-08-18 |
TZVanaalten | Merge branch 'develop' into features/hmmer |
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| 2017-08-17 |
TZVanaalten | JAL-2629 add documentation to previous work |
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| 2017-08-16 |
Jim Procter | JAL-2418 source formatting |
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| 2017-08-15 |
TZVanaalten | JAL-2629 add HMMER version check |
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| 2017-08-15 |
TZVanaalten | JAL-2629 selected HMM name now shown in HMMER menu |
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| 2017-08-15 |
TZVanaalten | JAL-2629 the HMMER tab is now disabled when HMMER is... |
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| 2017-08-14 |
TZVanaalten | JAL-2629 remove redundant options from HMMER menu |
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| 2017-08-08 |
TZVanaalten | JAL-2629 add ability to select hmmer binaries folder |
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| 2017-08-04 |
TZVanaalten | JAL-2629 multiple HMMs can now be dropped onto an alignment |
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| 2017-07-31 |
TZVanaalten | JAL-2629 add hmmalign command |
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| 2017-07-27 |
TZVanaalten | JAL-2629 implement hmmbuild |
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| 2017-07-25 |
TZVanaalten | JAL-2629 add non-functional HMMER menu |
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| 2017-07-14 |
TZVanaalten | add partial button fix to annotation and statistics... features/hmmer_statistics |
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| 2017-06-09 |
gmungoc | JAL-2446 merged to spike branch |
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| 2017-05-05 |
gmungoc | Merge branch 'develop' into features/JAL-2435splitScree... |
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| 2017-05-02 |
gmungoc | JAL-2499 JAL-2403 push 'configure for view' inside... |
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| 2017-04-07 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
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| 2017-03-31 |
gmungoc | JAL-1608 unused method removed |
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| 2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-1608createGroups bug/JAL-1608createGroups |
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| 2017-03-30 |
gmungoc | JAL-1608 leave Create Group, Remove Group menu items... |
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| 2017-02-27 |
gmungoc | JAL-1632 dialog to calculate either Tree or PCA |
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| 2017-02-13 |
gmungoc | JAL-1632 first cut of Tree chooser dialog and ScoreMode... |
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| 2017-02-09 |
gmungoc | JAL-1608 menu entry text; enable/disable Create/Remove... |
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| 2017-02-08 |
gmungoc | JAL-2399 JAL-2400 tidy Text Colour wording, behaviour... |
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| 2017-01-23 |
gmungoc | JAL-2386 unit tests for change colour (and minor refact... |
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| 2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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| 2017-01-19 |
gmungoc | JAL-2383 restore PID colour threshold from project... |
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| 2017-01-17 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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| 2017-01-11 |
gmungoc | JAL-2344 FileFormats singleton for formats, FileFormatI... |
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| 2016-12-21 |
gmungoc | JAL-2360 ColourMenuHelper now builds and selects items... |
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| 2016-12-20 |
gmungoc | JAL-2360 ColourSchemes holds configured schemes, AlignF... |
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| 2016-12-19 |
gmungoc | JAL-2361 select colour menu item by matching its name... |
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| 2016-12-16 |
gmungoc | JAL-2360 refactoring for JalviewColourScheme enum, |
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| 2016-12-13 |
gmungoc | JAL-2361 adding items to applet colour menus, TCoffee... |
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| 2016-12-12 |
gmungoc | JAL-2361 extract methods to (re-)build colour menu |
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| 2016-12-09 |
gmungoc | JAL-1895 suppress RNA interaction colour option |
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| 2016-11-28 |
gmungoc | Merge branch 'develop' into trialMerge |
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| 2016-11-25 |
gmungoc | Merge branch 'develop' into trialMerge |
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| 2016-11-24 |
gmungoc | Distinguish text-only output formats and others (.jar... |
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| 2016-11-24 |
tcofoegbu | JAL-2326 updated references of JOptionPane to JvOptionPane |
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| 2016-11-24 |
gmungoc | FileFormatI further tweaks, clean compile |
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| 2016-11-22 |
Jim Procter | JAL-1738 JAL-345 changed keystroke to ‘B’ (with modifie... |
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| 2016-11-02 |
Jim Procter | JAL-345 JAL-1738 menu item, AlignFrame action listener... |
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| 2016-10-25 |
Jim Procter | JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch |
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| 2016-10-06 |
Jim Procter | JAL-2089 Merge branch releases/Release_2_10_Branch... |
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| 2016-10-05 |
Jim Procter | JAL-2189 source formatting |
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| 2016-08-31 |
gmungoc | JAL-2077 test isPopupTrigger in mouseReleased or mouseC... |
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| 2016-08-24 |
gmungoc | JAL-1355 correct 'thereshold' to 'threshold' in message... |
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| 2016-08-23 |
gmungoc | JAL-2176 unused field / methods removed |
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| 2016-04-24 |
Jim Procter | JAL-2077 - reinstate popups on osx |
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| 2016-04-22 |
gmungoc | JAL-1812 JAL-2068 add Run Groovy Script to AlignFrame... |
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| 2015-12-22 |
gmungoc | JAL-391 new Calculate options to Reverse, Reverse Compl... |
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| 2015-10-16 |
Jim Procter | JAL-1925 update source version in license Release_2_9_0b2 |
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| 2015-10-08 |
Jim Procter | JAL-1894 update year/version in copyright |
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git://source.jalview.org / jalview.git / history