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Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / renderer / seqfeatures / FeatureRenderer.java
2023-05-22 James ProcterJAL-1551 spotless commit | commitdiff
2023-05-19 James ProcterJAL-1551 spotlessApply commit | commitdiff
2023-05-19 James ProcterJAL-1551 spotlessApply commit | commitdiff
2022-09-14 Jim ProcterMerge branch 'bug/JAL-3612_overviewFeatureOrdering... commit | commitdiff
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 commit | commitdiff
2020-12-11 gmungocJAL-3612 use _last_ drawn colour per feature type in... bug/JAL-3612_overviewFeatureOrdering commit | commitdiff
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop commit | commitdiff
2020-04-12 gmungocJAL-3596 change redacted commit | commitdiff
2020-04-12 gmungocJAL-3596 don't draw text over features if Show Text... commit | commitdiff
2020-04-07 gmungocJAL-3210 fudge for JalviewJS to avoid IntervalStore... commit | commitdiff
2019-06-06 gmungocMerge branch 'develop' into trialMerge commit | commitdiff
2019-02-28 gmungocJAL-3140 confine intervalstore imports to jalview.datam... commit | commitdiff
2019-02-21 gmungocJAL-3187 handle no mapping / complement features withou... commit | commitdiff
2019-02-19 gmungocJAL-3187 hacks to get peptide variant in to Jmol hover... commit | commitdiff
2019-02-18 gmungocJAL-3187 'on top' optional for complementary features commit | commitdiff
2019-01-25 gmungocJAL-3187 return a colour for linked features with trans... commit | commitdiff
2019-01-23 gmungocJAL-3187 fix out by one feature on structure position commit | commitdiff
2019-01-22 gmungocJAL-3187 clunky sort by renderorder in findComplementFe... commit | commitdiff
2019-01-21 gmungocJAL-3187 draw complement features on alignment / structure commit | commitdiff
2019-01-21 gmungocJAL-3187 findFeaturesAtResidue answer in render order... commit | commitdiff
2019-01-21 gmungocJAL-3187 (hacked up) show complement features on struct... commit | commitdiff
2018-11-29 gmungocJAL-3140 NCList now via IntervalStore library commit | commitdiff
2017-11-07 gmungocJAL-2069 update spike branch with latest commit | commitdiff
2017-11-07 gmungocJAL-2816 tweaks to feature visibility checks commit | commitdiff
2017-11-02 gmungocJAL-2808 spike updated with latest commit | commitdiff
2017-11-02 gmungocJAL-2808 feature filters held on FeatureRenderer, getCo... commit | commitdiff
2017-10-24 gmungocJAL-2738 update spike branch with latest commit | commitdiff
2017-10-20 gmungocPush 1793 latest to spike branch commit | commitdiff
2017-10-17 Jim ProcterJAL-2481 patch to fix findFeatureColour for end-of... commit | commitdiff
2017-10-09 Jim ProcterJAL-2446 remove duplicate code from pulled up method. commit | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo commit | commitdiff
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList commit | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting commit | commitdiff
2017-07-24 gmungocspike branch updated from latest features/JAL-2446 commit | commitdiff
2017-07-23 gmungocJAL-2481 JAL-2624 test for render feature below score... commit | commitdiff
2017-07-23 gmungocMerge branch 'develop' into features/JAL-2446NCList commit | commitdiff
2017-07-22 gmungocJAL-2624 check feature colour threshold when colouring... commit | commitdiff
2017-06-30 gmungocJAL-2526 correct treatment of contact features only... commit | commitdiff
2017-06-22 gmungocJAL-2481 JAL-2593 JAL-2526 further optimisation of... commit | commitdiff
2017-06-09 gmungocJAL-2446 merged to spike branch commit | commitdiff
2017-06-09 gmungocJAL-2589 render colour scheme gap colour in overview bug/JAL-2589gapColour commit | commitdiff
2017-06-09 gmungocJAL-2593 avoid redundant rendering of co-located features commit | commitdiff
2017-06-01 gmungocJAL-2754 Sequence.findFeatures(fromCol, toCol) features/JAL-2754findFeaturesByColumn commit | commitdiff
2017-05-31 gmungocJAL-2574 preparation for Sequence.findFeatures(col1... commit | commitdiff
2017-05-29 gmungocJAL-2526 Sequence.findPositions to get residue position... commit | commitdiff
2017-05-12 gmungocJAL-2480 efficient test for features present on sequence commit | commitdiff
2017-04-26 gmungocJAL-2490 findFeaturesAtRes with performant feature... commit | commitdiff
2017-03-22 gmungocJAL-2446 optimised new method to find feature colour... commit | commitdiff
2017-03-22 gmungocMerge branch 'develop' into features/JAL-2446NCList commit | commitdiff
2017-03-21 gmungocJAL-2438 removed (non-functional) lastSeq, lastSequence... commit | commitdiff
2017-03-20 gmungocJAL-2446 FeatureStore with NCList - work in progress commit | commitdiff
2017-03-15 gmungocJAL-2438 clarify code and javadoc, reinstate updateFeat... commit | commitdiff
2017-03-14 gmungocJAL-2438 unit test, fixes, Javadoc updates commit | commitdiff
2017-03-14 gmungocJAL-2438 comment/Javadoc tidies commit | commitdiff
2017-03-13 gmungocJAL-2438 corrected handling of default colour commit | commitdiff
2017-03-13 gmungocJAL-2438 FeatureColourFinder refactored from FeatureRen... commit | commitdiff
2016-11-17 gmungocJAL-2323 revert to thread-safe iteration over array... commit | commitdiff
2016-11-17 gmungocJAL-2327 disulfide bond abstracted to SequenceFeature... commit | commitdiff
2016-11-16 gmungocJAL-2323 render disulfide bond correctly on overview... commit | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch commit | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... commit | commitdiff
2016-07-18 Jim ProcterMerge branch 'features/JAL-2068groovyAnnotationWorker... commit | commitdiff
2016-06-20 Jim ProcterMerge branch 'develop' into features/JAL-2068groovyAnno... features/JAL-2068groovyAnnotationWorker commit | commitdiff
2016-05-10 gmungocMerge branch 'develop' into features/JAL-1956_featureStyles commit | commitdiff
2016-05-04 gmungocJAL-2090 removed test for Java > 1.1 to enable transparency commit | commitdiff
2016-05-03 gmungocJAL-2068 minimised jalview.gui imports, test for remove... commit | commitdiff
2016-02-24 gmungocJAL-2015 JAL-1956 rollout of FeatureColourI in place of JAL-1956_featureStyles commit | commitdiff
2016-02-12 gmungocJAL-2008 avoid unnecessary repaints; signatures changed... commit | commitdiff
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 commit | commitdiff
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 licencing for new files in src commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports commit | commitdiff
2015-07-23 Jim ProcterJAL-1819 use Float.isNaN() to check for NaNs! commit | commitdiff
2015-03-27 tcofoegbumerge commit commit | commitdiff
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch commit | commitdiff
2015-02-19 gmungocJAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor commit | commitdiff
2015-01-09 Jim ProcterJAL-1483 formatting commit | commitdiff
2015-01-09 Jim ProcterJAL-1483 remember to look at base dataset sequence... commit | commitdiff
2014-08-08 j.procter@dundee... JAL-1482 feature renderer and manipulation code refacto... commit | commitdiff