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JAL-3205 added a delta parameter to Matrix.equals()
2019-03-05 gmungocJAL-3205 added a delta parameter to Matrix.equals()
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2019-03-04 gmungocJAL-3205 worked examples in unit test for symmetric...
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2019-03-03 gmungocJAL-3205 one more unit test case
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2019-03-03 gmungocJAL-3205 faster calculation with symmetric score matrix
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2019-03-01 gmungocMerge branch 'bug/JAL-2791exportFilteredFeature' into...
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2019-03-01 gmungocMerge branch 'feature/JAL-3093wrappedModeTooltips'...
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2019-03-01 gmungocJAL-3093 unit test adapts to actual number of annotation...
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2019-03-01 gmungocMerge branch 'feature/JAL-3093wrappedModeTooltips'...
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2019-03-01 gmungocMerge branch 'feature/JAL-1244stretchStatusMsg' into...
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2019-03-01 gmungocMerge branch 'bug/JAL-3139colocatedFeatures' into develop
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2019-03-01 gmungocJAL-3154 disable reorder columns before adding to viewport
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2019-03-01 gmungocMerge branch 'bug/JAL-3154tableColumnDrag' into develop
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2019-03-01 gmungocMerge branch 'bug/JAL-3161annotationTooltipRange' into...
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2019-03-01 gmungocMerge branch 'bug/JAL-3158selectionBroadcasts' into...
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2019-03-01 gmungocMerge branch 'bug/JAL-3164complementOverview' into...
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2019-03-01 gmungocMerge branch 'merge/JAL-3140' into develop
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2019-03-01 gmungocJAL-3140 update for change to SequenceI api
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2019-03-01 gmungocMerge branch 'feature/intervalStoreJ' into merge/JAL...
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2019-03-01 gmungocJAL-3140 reduced coupling to intervalstore.jar
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2019-02-28 gmungocJAL-3140 confine intervalstore imports to jalview.datamodel...
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2019-02-28 gmungocMerge branch 'bug/JAL-2420revealAllMenu' into develop
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2019-02-28 gmungocMerge branch 'bug/JAL-3166npeAllRowsHidden' into develop
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2019-02-28 gmungocMerge branch 'feature/JAL-3169cancelOverwrite' into...
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2019-02-28 gmungocMerge branch 'feature/JAL-3143ensemblJSON' into merge...
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2019-02-28 gmungocMerge remote-tracking branch 'origin/feature/JAL-3141_backup...
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2019-02-27 gmungocJAL-2527 default Overview 'hide hidden' i.e. WYSIWYG
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2019-02-26 gmungocJAL-3201 group colour schemes distinct instances
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2019-02-25 gmungocJAL-3200 fast lookup of DSSP3 notation
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2019-02-24 gmungocJAL-3198 don't recalculate group conservation for Id...
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2019-02-24 gmungocJAL-3198 SequenceGroup 'bulk constructor' without duplicates...
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2019-02-22 gmungocJAL-2915 don't recalculate Overview on scroll to position...
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2019-02-22 gmungocJAL-2738 don't set AF as feature score
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2019-02-07 gmungocJAL-3140 updated to latest intervalstore.jar
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2019-02-04 gmungocJAL-3143 update unit test for ID -> id change
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2019-01-29 gmungocJAL-3143 format alleles array for feature description
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2019-01-24 gmungocJAL-3018 Ensembl version updated to 9.0
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2019-01-23 gmungocJAL-3063 correct handling of absent choice element...
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2019-01-18 gmungocJAL-3143 'id' not 'ID' attribute drives generation...
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2019-01-14 gmungocJAL-3186 remove Variable Colour from popup menu
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2019-01-14 gmungocJAL-3186 remove duplicate message keys
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2019-01-14 gmungocJAL-2069 wider dialog so all fields show!
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2019-01-14 gmungocJAL-2069 clear any error colour when setting threshold...
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2019-01-14 gmungocJAL-3125 tidy up
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2019-01-14 gmungocJAL-3125 avoid slider 'rounding' threshold field value
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2019-01-03 gmungocJAL-1889 additional test for clover-added fields
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2019-01-03 gmungocJAL-1889 ignore 'synthetic' fields added for jacoco
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2018-12-21 gmungocJAL-1767 minimise local variable scope
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2018-12-19 gmungocJAL-3178 include non-positional features in their group...
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2018-12-19 gmungocJAL-2791 JAL-2808 correct Javadoc for api method
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2018-12-19 gmungocJAL-3032 ignore /site also on non-JS branches
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2018-12-10 gmungocJAL-1421 added type to List and Vector
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2018-12-10 gmungocJAL-3169 leave file browser open on Cancel in overwrite...
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2018-12-06 gmungocJAL-1854 fix Checkstyle import violations
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2018-12-06 gmungocJAL-1854 Checkstyle updated to 8.12
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2018-12-03 gmungocJAL-3063 Castor removed from codebase
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2018-12-03 gmungocMerge branch 'feature/JAL-3063JAXB' into feature/JAL...
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2018-11-30 gmungocJAL-2420 don't offer Reveal All over alignment panel
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2018-11-30 gmungocJAL-3166 catch NPE if all sequences are hidden
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2018-11-29 gmungocJAL-3140 updated IntervalStore jar
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2018-11-29 gmungocJAL-3140 named tagged version of intervalstore.jar
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2018-11-29 gmungocJAL-3140 NCList now via IntervalStore library
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2018-11-28 gmungocJAL-3164 redraw complement overview on hide columns
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2018-11-28 gmungocJAL-3158 additional calls to reset 'selection changed...
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2018-11-22 gmungocJAL-3161 limit tooltip and status updates to visible...
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2018-11-19 gmungocJAL-3154 disable drag to reorder JTable columns
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2018-11-08 gmungocJAL-1889 ignore Clover instrumentation in test (second...
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2018-11-08 gmungocJAL-1889 unit test tweaks for running on server
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2018-10-25 gmungocJAL-3143 unit tests updated for code changes!
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2018-10-25 gmungocJAL-3143 comma-delimited feature attributes for alleles,
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2018-10-25 gmungocJAL-3143 fetch Ensembl(Genomes) features as JSON not GFF
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2018-10-23 gmungocJAL-3139 check group visibility when removing 'redundant...
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2018-10-08 gmungocJAL-1244 comments, javadoc, method signature tweaks
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2018-10-08 gmungocJAL-1244 editSequence extract method refactoring
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2018-10-05 gmungocJAL-1244 improved status message for insert/delete gap
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2018-10-04 gmungocJAL-3132 status message for sequence and/or graph group...
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2018-10-04 gmungocJAL-1244 no status message (yet) for locked edit of...
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2018-10-04 gmungocJAL-1244 status message for insert/delete gaps on single...
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2018-10-04 gmungocJAL-1244 status message while dragging a stretch group
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2018-10-04 gmungocJAL-3132 set status message when over sequence id or...
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2018-10-04 gmungocJAL-3093 unit tests, no mouse action over left/right...
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2018-10-03 gmungocJAL-3093 tweaks to code and test for 3px gap above...
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2018-10-02 gmungocJAL-3093 unit tests for SeqPanel.findMousePosition
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2018-10-02 gmungocJAL-3093 limited Consensus popup menu when in wrapped...
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2018-10-02 gmungocJAL-3093 added MousePos.isOverAnnotation() for extra...
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2018-10-01 gmungocJAL-3093 'read-only' annotations when in wrapped mode
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2018-10-01 gmungocJAL-3093 refactor (+test) Annotation Labels tooltip...
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2018-10-01 gmungocJAL-3093 unit tests for finding annotation row index...
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2018-10-01 gmungocJAL-3093 show annotation tooltips and status message...
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2018-09-28 gmungocJAL-3063 service param files read/saved using JAXB...
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2018-09-28 gmungocJAL-3063 top level element added to JalviewWsParamSet.xsd
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2018-09-28 gmungocJAL-3063 comments re use of xjc to generate Java binding...
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2018-09-27 gmungocJAL-2791 refactored Export Features to apply all visibility...
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2018-09-27 gmungocJAL-2791 new method to test if feature fails colour...
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2018-09-27 gmungocJAL-2791 method that tests all conditions for feature...
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2018-09-26 gmungocJAL-3125 tidy up
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2018-09-26 gmungocJAL-3125 avoid slider 'rounding' threshold field value
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2018-09-24 gmungocJAL-3063 tidy commented out code
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2018-09-21 gmungocJAL-3063 wrappers with check for null getting optional...
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2018-09-20 gmungocJAL-2843 tweaks to help text for filters
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2018-09-20 gmungocJAL-2843 help text for colour by attribute, feature...
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