git://source.jalview.org / jalview.git / search
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
JAL-1793 apply URL decoding when saving VCF attribute values (%3D -> =)
2019-07-05 gmungocJAL-1793 apply URL decoding when saving VCF attribute...
commit | commitdiff | tree
2019-06-18 gmungocJAL-3187 javadoc
 commit | commitdiff | tree
2019-06-18 gmungocJAL-3304 option to export linked features also for...
commit | commitdiff | tree
2019-06-18 gmungocJAL-3304 option to export linked features in Jalview...
commit | commitdiff | tree
2019-06-18 gmungocJAL-3187 i18n show linked features checkboxes
 commit | commitdiff | tree
2019-06-18 gmungocJAL-3305 mirror popup menu column selections in split...
commit | commitdiff | tree
2019-06-17 gmungocJAL-2792 JAL-3187 linked features (if shown) in Feature...
commit | commitdiff | tree
2019-06-17 gmungocJAL-3187 update alignAs code and unit tests for 'shared...
commit | commitdiff | tree
2019-06-17 gmungocJAL-3187 update unit test - protein variants not now...
commit | commitdiff | tree
2019-06-17 gmungocJAL-3187 add sequence to feature details table (and...
commit | commitdiff | tree
2019-06-14 gmungocJAL-3302 transfer visible 'linked' features to Chimera
 commit | commitdiff | tree
2019-06-13 gmungocJAL-3303 ignore deletions when computing peptide variants
 commit | commitdiff | tree
2019-06-11 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures
 commit | commitdiff | tree
2019-06-11 gmungocJAL-3143 also parse "phase" from JSON response if present
 commit | commitdiff | tree
2019-06-11 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures
 commit | commitdiff | tree
2019-06-11 gmungocJAL-3111 update release date placeholder
 commit | commitdiff | tree
2019-06-11 gmungocJAL-3288 fixes for gain/lose focus
 commit | commitdiff | tree
2019-06-11 gmungocJAL-3187 CDS has same dataset sequence as transcript
 commit | commitdiff | tree
2019-06-07 gmungocJAL-3187 save and restore flags for show complement...
commit | commitdiff | tree
2019-06-07 gmungocJAL-3187 change fields to local variables
 commit | commitdiff | tree
2019-06-07 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures
 commit | commitdiff | tree
2019-06-07 gmungocMerge branch 'bug/JAL-3288splitFrameMenusJava11' into...
commit | commitdiff | tree
2019-06-07 gmungocJAL-3187 Viewport schema attributes for showComplementFeatur...
commit | commitdiff | tree
2019-06-07 gmungocJAL-3251 added optional attributes Sequence.biotype...
commit | commitdiff | tree
2019-06-07 gmungocJAL-2738 use GeneLocus extends DBRefEntry to hold chromosoma...
commit | commitdiff | tree
2019-06-06 gmungocMerge branch 'bug/JAL-3288splitFrameMenusJava11' into...
commit | commitdiff | tree
2019-06-06 gmungocJAL-3187 deletions (of Castor code) after merge from...
commit | commitdiff | tree
2019-06-06 gmungocMerge branch 'develop' into trialMerge
 commit | commitdiff | tree
2019-06-06 gmungocJAL-3187 commit to enable merge from develop
 commit | commitdiff | tree
2019-06-05 gmungocJAL-3288 override JInternalFrame.setSelected() to avoid...
commit | commitdiff | tree
2019-05-29 gmungocJAL-2738 error logging if no ##reference found
 commit | commitdiff | tree
2019-05-29 gmungocJAL-2738 accept .csi, default to GRCh37:homo_sapiens...
commit | commitdiff | tree
2019-05-27 gmungocJAL-3141 test file in test folder not examples
 commit | commitdiff | tree
2019-05-24 gmungocJAL-1988 Spanish typo corrección
 commit | commitdiff | tree
2019-05-22 gmungocJAL-3111 help file spelling correction
 commit | commitdiff | tree
2019-05-21 gmungocJAL-3273 small correction to expected result calculation
 commit | commitdiff | tree
2019-05-06 gmungocJAL-3240 known issue for release notes
 commit | commitdiff | tree
2019-05-06 gmungocJAL-3239 release note
 commit | commitdiff | tree
2019-05-06 gmungocJAL-3244 release note
 commit | commitdiff | tree
2019-05-06 gmungocMerge remote-tracking branch 'origin/bug/JAL-3239monospacedE...
commit | commitdiff | tree
2019-05-06 gmungocJAL-3244 delete obsolete method
 commit | commitdiff | tree
2019-05-02 gmungocJAL-3239 draw EPS or SVG one character at a time (even...
commit | commitdiff | tree
2019-05-02 gmungocMerge branch 'bug/JAL-3244jmolWindows' into develop
 commit | commitdiff | tree
2019-05-02 gmungocJAL-3244 renamed Platform method for clarity
 commit | commitdiff | tree
2019-05-01 gmungocJAL-3244 ignore file path separator when comparing...
commit | commitdiff | tree
2019-04-30 gmungocJAL-3241 simplified enum constructors for classloadability...
commit | commitdiff | tree
2019-04-29 gmungocJAL-2738 JAL-2743 update unit test to match new VCF...
commit | commitdiff | tree
2019-04-29 gmungocJAL-3003 help page mention EPS doesn't support transparency
 commit | commitdiff | tree
2019-04-26 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2019-04-26 gmungocJAL-2743 class Javadoc
 commit | commitdiff | tree
2019-04-26 gmungocJAL-2738 JAL-2743 properties to map VCF header to species...
commit | commitdiff | tree
2019-04-26 gmungocJAL-3010 borderless 'x' for "delete this filter condition"
 commit | commitdiff | tree
2019-04-26 gmungocJAL-2808 better tooltip 'delete this condition'
 commit | commitdiff | tree
2019-04-20 gmungocJAL-2791 tailored message if find fails on selection...
commit | commitdiff | tree
2019-04-18 gmungocJAL-1793 basic help text for VCF option
 commit | commitdiff | tree
2019-04-18 gmungocJAL-3111 additional release notes
 commit | commitdiff | tree
2019-04-18 gmungocJAL-3111 small simplification of table tags, valign top
 commit | commitdiff | tree
2019-04-18 gmungocJAL-3111 release notes first pass complete
 commit | commitdiff | tree
2019-04-18 gmungocJAL-2620 updated help page to mention alternative genetic...
commit | commitdiff | tree
2019-04-18 gmungocJAL-3193 dbSource always "ENSEMBL"
 commit | commitdiff | tree
2019-04-16 gmungocMerge branch 'bug/JAL-3218scalePanelPopups' into develop
 commit | commitdiff | tree
2019-04-15 gmungocJAL-3193 no separatge EnsemblGenomes source in SequenceFetcher
 commit | commitdiff | tree
2019-04-10 gmungocJAL-3193 rest.ensemblgenomes.org merged to rest.ensembl.org
 commit | commitdiff | tree
2019-04-10 gmungocJAL-3018 REST version updated to 10.0
 commit | commitdiff | tree
2019-04-03 gmungocJAL-3021 show Sequence Details with cursor at top
 commit | commitdiff | tree
2019-04-02 gmungocJAL-3218 allow both Hide and Reveal in scale panel...
commit | commitdiff | tree
2019-03-29 gmungocJAL-3140 InstallAnywhere updated to intervalstore-v1...
commit | commitdiff | tree
2019-03-29 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2019-03-29 gmungocJAL-3140 intervalstore now v1.0 (public release)
 commit | commitdiff | tree
2019-03-28 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2019-03-28 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2019-03-28 gmungocJAL-1889 patch for failing isControDown test on build...
commit | commitdiff | tree
2019-03-28 gmungocMerge branch 'feature/JAL-3181linkOrdering' into develop
 commit | commitdiff | tree
2019-03-27 gmungocJAL-2620 improved error reporting on failure to load...
commit | commitdiff | tree
2019-03-25 gmungocJAL-2717 adjusted code so default correctly returned...
commit | commitdiff | tree
2019-03-25 gmungocJAL-3127 scripts updated for method signature change
 commit | commitdiff | tree
2019-03-23 gmungocJAL-1889 explicit recalc of geometry for scale left...
commit | commitdiff | tree
2019-03-23 gmungocJAL-1889 remove debug logging, add updateLayout()
 commit | commitdiff | tree
2019-03-22 gmungocJAL-1889 more debug logging
 commit | commitdiff | tree
2019-03-21 gmungocJAL-1889 better debug logging
 commit | commitdiff | tree
2019-03-21 gmungocJAL-1889 temporary debug in findColumn()
 commit | commitdiff | tree
2019-03-21 gmungocJAL-1889 added belt and braces deleteOnExit() to test...
commit | commitdiff | tree
2019-03-21 gmungocJAL-1889 correct props param, remove dasserver, output...
commit | commitdiff | tree
2019-03-21 gmungocJAL-1889 more diagnostics for CommandLineOperations
 commit | commitdiff | tree
2019-03-21 gmungocJAL-1889 diagnostics for failing test on server
 commit | commitdiff | tree
2019-03-20 gmungocJAL-3093 fine tuning of SeqPanel tooltip
 commit | commitdiff | tree
2019-03-20 gmungocJAL-3212 unit test and fix for Scale Panel bug
 commit | commitdiff | tree
2019-03-15 gmungocJAL-2964 missed branch for restore link tree to all...
commit | commitdiff | tree
2019-03-15 gmungocJAL-3203 Overview show hidden default false also in...
commit | commitdiff | tree
2019-03-12 gmungocJAL-1270 missing 'alwaysRun=true' added to setup/teardown
 commit | commitdiff | tree
2019-03-12 gmungocMerge branch 'feature/JAL-3127_seqidChainshading' into...
commit | commitdiff | tree
2019-03-12 gmungocJAL-3127 check for null viewport
 commit | commitdiff | tree
2019-03-11 gmungocMerge branch 'develop' into merge/JAL-3127
 commit | commitdiff | tree
2019-03-11 gmungocJAL-1270 JAL-2416 JAL-2839 set alwaysRun=true in test...
commit | commitdiff | tree
2019-03-11 gmungocJAL-3127 fix faulty merge
 commit | commitdiff | tree
2019-03-11 gmungocMerge branch 'develop' into merge/JAL-3127
 commit | commitdiff | tree
2019-03-11 gmungocMerge branch 'feature/JAL-2250colourAllGroups' into...
commit | commitdiff | tree
2019-03-11 gmungocJAL-3201 restore group colours correctly from project
 commit | commitdiff | tree
2019-03-11 gmungocMerge branch 'feature/JAL-3127_seqidChainshading' into...
commit | commitdiff | tree
2019-03-11 gmungocJAL-3206 strict above/below threshold test restored
 commit | commitdiff | tree
next