git://source.jalview.org / jalview.git / search
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
JAL-2110 additional tests for setDatasetSequence, javadoc for isProtein
2016-10-03 gmungocJAL-2110 additional tests for setDatasetSequence, javadoc...
commit | commitdiff | tree
2016-09-30 gmungocJAL-2236 code restored (and some compiler warnings...
commit | commitdiff | tree
2016-09-30 gmungocMerge branch 'develop' into features/JAL-1856dbRefFetcherMes...
commit | commitdiff | tree
2016-09-30 gmungocJAL-2234 FER1_ARATH renamed FER2_ARATH and vice versa
 commit | commitdiff | tree
2016-09-30 gmungocJAL-2236 fixes for desktop and applet implementation...
commit | commitdiff | tree
2016-09-29 gmungocJAL-1856 better warning messages for sequence matching...
commit | commitdiff | tree
2016-09-29 gmungocJAL-2213 code warnings addressed (typed collections...
commit | commitdiff | tree
2016-09-29 gmungocJAL-2213 removed PDB from db sources list; also code...
commit | commitdiff | tree
2016-09-29 gmungocJAL-2213 made RESNUM constant private (not used elsewhere...
commit | commitdiff | tree
2016-09-29 gmungocJAL-2213 corrected wait for files to load in Jmol;...
commit | commitdiff | tree
2016-09-29 gmungocJAL-2237 apply default filter as sort in initial search
 commit | commitdiff | tree
2016-09-29 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2016-09-29 gmungocJAL-2047 allow title to be shrunk; spelling fix
 commit | commitdiff | tree
2016-09-29 gmungocJAL-1544 typo
 commit | commitdiff | tree
2016-09-29 gmungocJAL-1903 increase REST reply timeout from 5 to 15 seconds
 commit | commitdiff | tree
2016-09-27 gmungocJAL-2233 less verbose logging for Jmol
 commit | commitdiff | tree
2016-09-27 gmungocJAL-2231 save preferred scroll height _without_ progress...
commit | commitdiff | tree
2016-09-27 gmungocJAL-2230 JAL-2049 added sequence feature transfer to
 commit | commitdiff | tree
2016-09-27 gmungocJAL-2230 use correct mapping to transfer features to...
commit | commitdiff | tree
2016-09-23 gmungocJAL-2214 Javadoc
 commit | commitdiff | tree
2016-09-22 gmungocJAL-1421 use declared type of ResidueProperties.propHash
 commit | commitdiff | tree
2016-09-22 gmungocJAL-1421 typed ResidueProperties.propHash; JAL-2176...
commit | commitdiff | tree
2016-09-22 gmungocJAL-2216 null currentAlignFrame on close all windows...
commit | commitdiff | tree
2016-09-22 gmungocJAL-2216 finalize call super.finalize()
 commit | commitdiff | tree
2016-09-22 gmungocJAL-2216 finalise corrected to finalize
 commit | commitdiff | tree
2016-09-22 gmungocJAL-2216 explicitly null AnnotationPanel and AnnotationRende...
commit | commitdiff | tree
2016-09-22 gmungocJAL-2216 finalize() refactored so not called programmatically
 commit | commitdiff | tree
2016-09-22 gmungocJAL-2216 new dispose() method to null references
 commit | commitdiff | tree
2016-09-22 gmungocJAL-2216 finalize call super.finalize()
 commit | commitdiff | tree
2016-09-20 gmungocJAL-1306 calculate Quality also when Conservation not...
commit | commitdiff | tree
2016-09-19 gmungocJAL-2118 reorder annotations after add/delete/hide...
commit | commitdiff | tree
2016-09-19 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2016-09-19 gmungocJAL-2172 test and code updates for readonly selection...
commit | commitdiff | tree
2016-09-19 gmungocJAL-1353 small tidy of test
 commit | commitdiff | tree
2016-09-19 gmungocJAL-1270 use test properties file
 commit | commitdiff | tree
2016-09-16 gmungocJAL-2157 JAL-1803 refactored Sequence.updatePDBIds...
commit | commitdiff | tree
2016-09-16 gmungocJAL-2183 don't open two free text panels; give input...
commit | commitdiff | tree
2016-09-16 gmungocJAL-2183 avoid duplicate closeDialog()
 commit | commitdiff | tree
2016-09-16 gmungocJAL-2164 removed unused parameters from JmolParser...
commit | commitdiff | tree
2016-09-16 gmungocJAL-1270 JAL-1919 ensure Temp Factor is OFF for test...
commit | commitdiff | tree
2016-09-13 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2016-09-13 gmungocJAL-1803 tests added for PDBEntry.Type
 commit | commitdiff | tree
2016-09-13 gmungocJAL-1803 extracted class ChainId to jalview.util.CaseInsensi...
commit | commitdiff | tree
2016-09-13 gmungocJAL-2119 use File.separator not "/"
 commit | commitdiff | tree
2016-09-12 gmungocJAL-2119 case-sensitive href filename checking
 commit | commitdiff | tree
2016-09-12 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2016-09-07 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2016-09-07 gmungocJAL-2164 fix failing test
 commit | commitdiff | tree
2016-09-06 gmungocJAL-2106 DBRefEntry.isPrimary() renamed isPrimaryCandidate()
 commit | commitdiff | tree
2016-09-06 gmungocJAL-2147 additional test coverage for findMappingsForSequenc...
commit | commitdiff | tree
2016-09-05 gmungocJAL-2154 made Java 7 compatible
 commit | commitdiff | tree
2016-09-05 gmungocJAL-2106 increased coverage for testGetPrimaryDbRefs
 commit | commitdiff | tree
2016-09-05 gmungocJAL-2106 corrections to DBRefEntry.isPrimary code and...
commit | commitdiff | tree
2016-09-02 gmungocJAL-1854 distinct messages for TODO/FIXME and DOCUMENT ME
 commit | commitdiff | tree
2016-09-01 gmungocJAL-2077 don't mess with the look and feel
 commit | commitdiff | tree
2016-09-01 gmungocJAL-2077 less drastic exit on close
 commit | commitdiff | tree
2016-09-01 gmungocJAL-2077 test harness for inspecting mouse events
 commit | commitdiff | tree
2016-09-01 gmungocJAL-2077 check isPopupTrigger in mouseReleased not...
commit | commitdiff | tree
2016-09-01 gmungocJAL-1421 add generics to NJTree, refactor recursive...
commit | commitdiff | tree
2016-09-01 gmungocJAL-1854 rule to disallow import of swing in appletgui
 commit | commitdiff | tree
2016-09-01 gmungocJAL-2077 do nothing in mousePressed if right button...
commit | commitdiff | tree
2016-09-01 gmungocJAL-2077 force defer right-click handling to mouseReleased...
commit | commitdiff | tree
2016-08-31 gmungocJAL-2077 test isPopupTrigger in mouseReleased or mouseClicke...
commit | commitdiff | tree
2016-08-31 gmungocJAL-2077 more javadoc
 commit | commitdiff | tree
2016-08-31 gmungocMerge branch 'develop' of https://source.jalview.org...
commit | commitdiff | tree
2016-08-31 gmungocJAL-2077 check for isPopupTrigger() in mousePressed...
commit | commitdiff | tree
2016-08-31 gmungocJAL-1670 repositioned feature for backwards compatibility...
commit | commitdiff | tree
2016-08-30 gmungocJAL-2183 defensive check for openFrameCount < 0 (shouldn...
commit | commitdiff | tree
2016-08-30 gmungocJAL-2183 simplified database tree actionPerformed,...
commit | commitdiff | tree
2016-08-30 gmungocJAL-2183 revised change (= no change)
 commit | commitdiff | tree
2016-08-30 gmungocJAL-2183 formatter added @Override (only)
 commit | commitdiff | tree
2016-08-30 gmungocJAL-2183 removed redundant (overriden) add panel to...
commit | commitdiff | tree
2016-08-29 gmungocJAL-1854 tweaks to rules and README
 commit | commitdiff | tree
2016-08-29 gmungocJAL-1854 checkstyle relocated to /utils, newlines to...
commit | commitdiff | tree
2016-08-29 gmungocMerge branch 'bug/JAL-1841rnaSecStr' into develop
 commit | commitdiff | tree
2016-08-29 gmungocJAL-1448 updated unit test for last change
 commit | commitdiff | tree
2016-08-29 gmungocJAL-1841 robustness fix
 commit | commitdiff | tree
2016-08-29 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
 commit | commitdiff | tree
2016-08-26 gmungocJAL-1854 two more rules, readme notes
 commit | commitdiff | tree
2016-08-26 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
 commit | commitdiff | tree
2016-08-26 gmungocJAL-1854 commented FallThrough rule
 commit | commitdiff | tree
2016-08-26 gmungocJAL-1854 corrected nested package rule
 commit | commitdiff | tree
2016-08-26 gmungocJAL-2049 set Ensembl variant source to ENSEMBL if ...
commit | commitdiff | tree
2016-08-26 gmungocJAL-1854 comment switch case fallthrough
 commit | commitdiff | tree
2016-08-25 gmungocJAL-1854 missing case break statements added
 commit | commitdiff | tree
2016-08-25 gmungocJAL-1854 initial checkstyle config
 commit | commitdiff | tree
2016-08-25 gmungocJAL-2178 remove duplicate Uniprot db source
 commit | commitdiff | tree
2016-08-25 gmungocJAL-1424 duplicate key removed
 commit | commitdiff | tree
2016-08-24 gmungocJAL-1355 correct 'thereshold' to 'threshold' in message...
commit | commitdiff | tree
2016-08-24 gmungocJAL-1424 removed unused and duplicated message keys
 commit | commitdiff | tree
2016-08-24 gmungocJAL-1424 tidy / recode MessageManager calls to support...
commit | commitdiff | tree
2016-08-24 gmungocJAL-1854 removed pointless method override
 commit | commitdiff | tree
2016-08-24 gmungocJAL-1424 removed two redundant (overwritten) setText...
commit | commitdiff | tree
2016-08-24 gmungocJAL-1424 corrected Message bundle lookup key
 commit | commitdiff | tree
2016-08-24 gmungocJAL-1424 undo i18n of exception message
 commit | commitdiff | tree
2016-08-24 gmungocJAL-1854 declare immutable class as final
 commit | commitdiff | tree
2016-08-24 gmungocJAL-1424 recode calls to MessageManager to allow code...
commit | commitdiff | tree
2016-08-24 gmungocJAL-2151 port fix to applet
 commit | commitdiff | tree
2016-08-24 gmungocJAL-1424 enhanced for cleaner reporting, checks calls...
commit | commitdiff | tree
2016-08-24 gmungocJAL-1424 also report (obsolete) keys in translated...
commit | commitdiff | tree
next