| 2020-04-16 |
gmungoc | JAL-3567 added 'imputed by Jalview' to protein consequence...
|
commit | commitdiff | tree |
| 2020-04-16 |
gmungoc | JAL-3567 report mapped location for virtual features...
|
commit | commitdiff | tree |
| 2020-04-12 |
gmungoc | JAL-3596 change redacted
|
commit | commitdiff | tree |
| 2020-04-12 |
gmungoc | JAL-3596 don't draw text over features if Show Text...
|
commit | commitdiff | tree |
| 2020-04-06 |
gmungoc | JAL-3581 no hidden sequence marker if hidden markers...
|
commit | commitdiff | tree |
| 2020-04-06 |
gmungoc | JAL-3579 no Feature Editor if features not shown
|
commit | commitdiff | tree |
| 2020-03-31 |
gmungoc | JAL-1889 better (?) wait for Conservation thread
|
commit | commitdiff | tree |
| 2020-03-19 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
|
commit | commitdiff | tree |
| 2020-03-19 |
gmungoc | JAL-3305 don't propagate an empty SelectionGroup to...
|
commit | commitdiff | tree |
| 2020-03-09 |
gmungoc | JAL-3528 unit tests added for failed lookup, Javadoc
|
commit | commitdiff | tree |
| 2020-03-09 |
gmungoc | JAL-3407 3549 in release notes
|
commit | commitdiff | tree |
| 2020-03-09 |
gmungoc | JAL-3549 JAL-3305 no Sort By Score / Density if no...
|
commit | commitdiff | tree |
| 2020-03-09 |
gmungoc | JAL-3412 update layout whenever desired id width changes
|
commit | commitdiff | tree |
| 2020-03-06 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
|
commit | commitdiff | tree |
| 2020-03-06 |
gmungoc | JAL-3187 unit test for findComplementFeaturesAtResidue
|
commit | commitdiff | tree |
| 2020-03-06 |
gmungoc | JAL-3407 added 3468 to release notes
|
commit | commitdiff | tree |
| 2020-03-06 |
gmungoc | Merge branch 'feature/JAL-3468featureDescriptionEllipsis...
|
commit | commitdiff | tree |
| 2020-03-06 |
gmungoc | JAL-3468 i18n and additional unit tests
|
commit | commitdiff | tree |
| 2020-03-06 |
gmungoc | JAL-3407 release note tweaks, added 3533 3538 3534...
|
commit | commitdiff | tree |
| 2020-02-20 |
gmungoc | JAL-3187 repaint complement after loading on features
|
commit | commitdiff | tree |
| 2020-02-18 |
Mungo Carstairs | JAL-3536 JAL-3187 don't create duplicate CDS-to-protein...
|
commit | commitdiff | tree |
| 2020-01-28 |
gmungoc | JAL-3341 debug for failing unit test
|
commit | commitdiff | tree |
| 2020-01-28 |
gmungoc | Merge branch 'feature/JAL-3121gffAttributeMap' into...
|
commit | commitdiff | tree |
| 2020-01-28 |
gmungoc | JAL-3187 one more obsolete method removed
|
commit | commitdiff | tree |
| 2020-01-24 |
gmungoc | JAL=3121 more data format validation/tests, help text...
|
commit | commitdiff | tree |
| 2020-01-23 |
gmungoc | JAL-3121 update help page for GFF column 9 nested attributes
|
commit | commitdiff | tree |
| 2020-01-23 |
gmungoc | JAL-3121 'attributes map' in GFF3 without special ...
|
commit | commitdiff | tree |
| 2019-11-01 |
gmungoc | JAL-3468 unit tests updated for changes
|
commit | commitdiff | tree |
| 2019-10-31 |
gmungoc | JAL-3468 truncate feature description to 40 chars in...
|
commit | commitdiff | tree |
| 2019-09-26 |
gmungoc | JAL-2481 remove code duplication left by merge
|
commit | commitdiff | tree |
| 2019-09-26 |
gmungoc | JAL-3441 action double-click in Feature Type column...
|
commit | commitdiff | tree |
| 2019-08-23 |
gmungoc | JAL-3141 correct cast of spinner value
|
commit | commitdiff | tree |
| 2019-08-22 |
gmungoc | JAL-3121 slightly cleaner parsing of, and unit test...
|
commit | commitdiff | tree |
| 2019-08-22 |
gmungoc | Merge branch 'develop' into feature/JAL-3121gffAttributeMap
|
commit | commitdiff | tree |
| 2019-08-22 |
gmungoc | JAL-3187 case-insensitive codon variant calculation
|
commit | commitdiff | tree |
| 2019-08-22 |
gmungoc | JAL-3121 round trip GFF attributes including map-valued...
|
commit | commitdiff | tree |
| 2019-08-22 |
gmungoc | JAL-3187 one more obsolete method removed
|
commit | commitdiff | tree |
| 2019-08-21 |
gmungoc | JAL-3187 minor code tidying, todo removal
|
commit | commitdiff | tree |
| 2019-08-19 |
gmungoc | JAL-3412 calculateIdWidth - more consistency, constants...
|
commit | commitdiff | tree |
| 2019-08-09 |
gmungoc | JAL-3187 removal of variant feature (non-virtual) transfer...
|
commit | commitdiff | tree |
| 2019-08-07 |
gmungoc | JAL-3187 (fudge) look in both alignments for stored...
|
commit | commitdiff | tree |
| 2019-08-07 |
gmungoc | Merge branch 'develop' into feature/JAL-3187linkedFeatures
|
commit | commitdiff | tree |
| 2019-07-31 |
gmungoc | JAL-3389 add .py to restored Chimera session filename...
|
commit | commitdiff | tree |
| 2019-07-31 |
gmungoc | Merge branch 'bug/JAL-3388structureChooserSorting'...
|
commit | commitdiff | tree |
| 2019-07-30 |
gmungoc | JAL-3198 more efficient Sequence.getDisplayId()
|
commit | commitdiff | tree |
| 2019-07-30 |
gmungoc | JAL-3388 correct class for column 0 Ref Sequence
|
commit | commitdiff | tree |
| 2019-07-29 |
gmungoc | JAL-3386 correct wrapped width calculation for headless...
|
commit | commitdiff | tree |
| 2019-07-29 |
gmungoc | JAL-3377 more reused of SeqCanvas.computeWrappedGeometry
|
commit | commitdiff | tree |
| 2019-07-29 |
gmungoc | JAL-3377 add seq-annotations gap to cheight not to...
|
commit | commitdiff | tree |
| 2019-07-29 |
gmungoc | JAL-3377 Javadoc added for getWrappedHeight()
|
commit | commitdiff | tree |
| 2019-07-29 |
gmungoc | JAL-3377 corrected wrapped widths height for IdCanvas
|
commit | commitdiff | tree |
| 2019-07-29 |
gmungoc | JAL-3377 include seq-annotation spacing in getWrappedHeight()
|
commit | commitdiff | tree |
| 2019-07-26 |
gmungoc | Merge branch 'features/JAL-3375vcfValidation' into
|
commit | commitdiff | tree |
| 2019-07-26 |
gmungoc | JAL-1793 only decode specific special characters in...
|
commit | commitdiff | tree |
| 2019-07-26 |
gmungoc | JAL-3376 capture VCF POS, ID, QUAL, FILTER as feature...
|
commit | commitdiff | tree |
| 2019-07-26 |
gmungoc | JAL-3375 format validate VCF Integer and Float fields
|
commit | commitdiff | tree |
| 2019-07-25 |
gmungoc | JAL-3375 ignore '.' values for VCF data
|
commit | commitdiff | tree |
| 2019-07-16 |
gmungoc | Merge branch 'develop' into feature/JAL-3187linkedFeatures
|
commit | commitdiff | tree |
| 2019-07-16 |
gmungoc | JAL-2987 tolerate null double values when formatting...
|
commit | commitdiff | tree |
| 2019-07-10 |
gmungoc | Merge branch 'develop' into feature/JAL-3187linkedFeatures
|
commit | commitdiff | tree |
| 2019-07-08 |
gmungoc | JAL-3187 derived peptide variants tweaks and tests
|
commit | commitdiff | tree |
| 2019-07-05 |
gmungoc | JAL-3187 initial refactoring towards peptide variant...
|
commit | commitdiff | tree |
| 2019-07-05 |
gmungoc | JAL-1793 apply URL decoding when saving VCF attribute...
|
commit | commitdiff | tree |
| 2019-07-04 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
|
commit | commitdiff | tree |
| 2019-07-04 |
gmungoc | JAL-3111 help pages minor corrections
|
commit | commitdiff | tree |
| 2019-06-18 |
gmungoc | JAL-3313 don't double count mapped codons
|
commit | commitdiff | tree |
| 2019-06-18 |
gmungoc | JAL-3187 javadoc
|
commit | commitdiff | tree |
| 2019-06-18 |
gmungoc | JAL-3304 option to export linked features also for...
|
commit | commitdiff | tree |
| 2019-06-18 |
gmungoc | JAL-3304 option to export linked features in Jalview...
|
commit | commitdiff | tree |
| 2019-06-18 |
gmungoc | JAL-3187 i18n show linked features checkboxes
|
commit | commitdiff | tree |
| 2019-06-18 |
gmungoc | JAL-3305 mirror popup menu column selections in split...
|
commit | commitdiff | tree |
| 2019-06-17 |
gmungoc | JAL-2792 JAL-3187 linked features (if shown) in Feature...
|
commit | commitdiff | tree |
| 2019-06-17 |
gmungoc | JAL-3187 update alignAs code and unit tests for 'shared...
|
commit | commitdiff | tree |
| 2019-06-17 |
gmungoc | JAL-3187 update unit test - protein variants not now...
|
commit | commitdiff | tree |
| 2019-06-17 |
gmungoc | JAL-3187 add sequence to feature details table (and...
|
commit | commitdiff | tree |
| 2019-06-14 |
gmungoc | JAL-3302 transfer visible 'linked' features to Chimera
|
commit | commitdiff | tree |
| 2019-06-13 |
gmungoc | JAL-3303 ignore deletions when computing peptide variants
|
commit | commitdiff | tree |
| 2019-06-13 |
gmungoc | JAL-3143 recognise lnc_RNA as transcript
|
commit | commitdiff | tree |
| 2019-06-11 |
gmungoc | Merge branch 'develop' into feature/JAL-3187linkedFeatures
|
commit | commitdiff | tree |
| 2019-06-11 |
gmungoc | JAL-3143 also parse "phase" from JSON response if present
|
commit | commitdiff | tree |
| 2019-06-11 |
gmungoc | Merge branch 'develop' into feature/JAL-3187linkedFeatures
|
commit | commitdiff | tree |
| 2019-06-11 |
gmungoc | JAL-3111 update release date placeholder
|
commit | commitdiff | tree |
| 2019-06-11 |
gmungoc | JAL-3288 fixes for gain/lose focus
|
commit | commitdiff | tree |
| 2019-06-11 |
gmungoc | JAL-3187 CDS has same dataset sequence as transcript
|
commit | commitdiff | tree |
| 2019-06-10 |
gmungoc | JAL-3296 ensure sequence cursor reset when sequence...
|
commit | commitdiff | tree |
| 2019-06-07 |
gmungoc | JAL-3187 save and restore flags for show complement...
|
commit | commitdiff | tree |
| 2019-06-07 |
gmungoc | JAL-3187 change fields to local variables
|
commit | commitdiff | tree |
| 2019-06-07 |
gmungoc | Merge branch 'develop' into feature/JAL-3187linkedFeatures
|
commit | commitdiff | tree |
| 2019-06-07 |
gmungoc | Merge branch 'bug/JAL-3288splitFrameMenusJava11' into...
|
commit | commitdiff | tree |
| 2019-06-07 |
gmungoc | JAL-3187 Viewport schema attributes for showComplementFeatur...
|
commit | commitdiff | tree |
| 2019-06-07 |
gmungoc | JAL-3251 added optional attributes Sequence.biotype...
|
commit | commitdiff | tree |
| 2019-06-07 |
gmungoc | JAL-2738 use GeneLocus extends DBRefEntry to hold chromosoma...
|
commit | commitdiff | tree |
| 2019-06-06 |
gmungoc | Merge branch 'bug/JAL-3288splitFrameMenusJava11' into...
|
commit | commitdiff | tree |
| 2019-06-06 |
gmungoc | JAL-3187 deletions (of Castor code) after merge from...
|
commit | commitdiff | tree |
| 2019-06-06 |
gmungoc | Merge branch 'develop' into trialMerge
|
commit | commitdiff | tree |
| 2019-06-06 |
gmungoc | JAL-3187 commit to enable merge from develop
|
commit | commitdiff | tree |
| 2019-06-05 |
gmungoc | JAL-3288 override JInternalFrame.setSelected() to avoid...
|
commit | commitdiff | tree |
| 2019-06-04 |
gmungoc | JAL-2386 avoid duplicate pdbids in free text query
|
commit | commitdiff | tree |
| 2019-05-29 |
gmungoc | JAL-2738 error logging if no ##reference found
|
commit | commitdiff | tree |
| 2019-05-29 |
gmungoc | JAL-2738 accept .csi, default to GRCh37:homo_sapiens...
|
commit | commitdiff | tree |
| next |
git://source.jalview.org / jalview.git / search