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JAL-3390 unit tests and command and menu refinements
2020-06-09 gmungocJAL-3390 unit tests and command and menu refinements
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2020-06-08 gmungocJAL-3390 obsolete classes/methods removed
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2020-06-08 gmungocMerge branch 'develop' into feature/JAL-3390hideUnmappedStru...
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2020-06-01 gmungocJAL-3518 test result corrected
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2020-06-01 gmungocJAL-3518 add alwaysRun = true [sigh]
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2020-06-01 gmungocJAL-3518 more test coverage for structure commands
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2020-05-29 gmungocJAL-2422 test updated
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2020-05-29 gmungocMerge branch 'feature/JAL-3551Pymol' into develop
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2020-05-29 gmungocJAL-3551 null pointer defence while structure files...
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2020-05-28 gmungocJAL-3551 corrected Pymol open session command
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2020-05-28 gmungocJAL-2422 correct ChimeraX save/open session commands...
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2020-05-26 gmungocMerge branch 'develop' of https://source.jalview.org...
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2020-05-26 gmungocJAL-1889 disable test failing on build server
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2020-05-26 gmungocJAL-3624 log when SIFTS mapping fails
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2020-05-26 gmungocMerge branch 'feature/JAL-3624siftsInJS' into develop
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2020-05-26 gmungocJAL-1761 pattern for structure viewer construction...
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2020-05-21 gmungocJAL-3551 copy Jalview features to Pymol 'p' (with pull...
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2020-05-21 gmungocJAL-2422 highlight ChimeraX selection (ChimeraX-1.0...
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2020-05-20 gmungocJAL-3626 use Viewer.scriptWait() to send Jmol commands...
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2020-05-19 gmungocJAL-3621 corrected sequence feature sort and test
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2020-05-19 gmungocJAL-3621 corrected sequence feature sort and test
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2020-05-19 gmungocMerge branch 'develop' into feature/JAL-3551Pymol
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2020-05-19 gmungocJAL-3624 use temp file for SIFT download in JS, correct...
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2020-05-18 gmungocJAL-3463 avoid Thread.sleep() as not supported in SwingJS
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2020-05-18 gmungocJAL-3621 update to intervalstore v1.1
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2020-05-18 gmungocJAL-3529 test updated for revised signature of getDBRefs()
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2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop
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2020-05-18 gmungocJAL-3613 remove debug code committed in error
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2020-05-15 gmungocJAL-2422 JAL-3551 unit tests updated for code changes
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2020-05-15 gmungocJAL-3619 default silently to Jmol if viewerType absent...
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2020-05-15 gmungocJAL-3551 pull up Close Viewer dialog to base class
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2020-05-15 gmungocMerge branch 'feature/JAL-3551Pymol' into feature/JAL...
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2020-05-15 gmungocJAL-3551 raise label on ('highlight') structure residue...
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2020-05-12 gmungocJAL-3518 tidy method, remove obsolete comment
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2020-05-12 gmungocJAL-3518 failsafe check for null Jmol filename while...
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2020-05-11 gmungocJAL-3551 concatenate colour by sequence commands for...
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2020-05-11 gmungocJAL-2422 JAL-3551 viewer text/variables generalised...
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2020-05-11 gmungocJAL-2422 ChimeraX paths (versions up to 1.0) added...
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2020-05-11 gmungocJAL-1333 additional Chimera versions for Windows installatio...
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2020-05-11 gmungocJAL-2422 restore saved ChimeraX session from project
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2020-05-01 gmungocJAL-3613 check sequence overlap when matching search...
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2020-04-30 gmungocJAL-3551 save structure viewer session refactorings...
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2020-04-30 gmungocJAL-3551 tidied error handling for HTTP request
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2020-04-25 gmungocMerge branch 'develop' into feature/JAL-3551Pymol
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2020-04-21 gmungocJAL-3210 try adding setup method to unit test failing...
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2020-04-21 gmungocJAL-1889 corrected wait for consensus to be calculated
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2020-04-21 gmungocJAL-3603 load annotation file from RELATIVE_URL in...
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2020-04-17 gmungocJAL-3567 unit tests for linked feature tooltips
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2020-04-16 gmungocJAL-3567 adjust layout of linked feature report, unit...
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2020-04-16 gmungocJAL-3567 added 'imputed by Jalview' to protein consequence...
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2020-04-16 gmungocJAL-3567 report mapped location for virtual features...
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2020-04-14 gmungocJAL-3583 remove debug logging, Javadoc added
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2020-04-13 gmungocJAL-3574 test coverage corners
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2020-04-13 gmungocJAL-3574 Matcher with integer/long value pattern (e...
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2020-04-12 gmungocJAL-3596 change redacted
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2020-04-12 gmungocJAL-3596 don't draw text over features if Show Text...
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2020-04-12 gmungocJAL-3583 consistent last[Formatted]Tooltip, show once...
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2020-04-07 gmungocJAL-3210 fudge for JalviewJS to avoid IntervalStore...
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2020-04-06 gmungocJAL-3581 no hidden sequence marker if hidden markers...
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2020-04-06 gmungocJAL-3581 no hidden sequence marker if hidden markers...
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2020-04-06 gmungocMerge branch 'develop' into Jalview-JS/develop
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2020-04-06 gmungocJAL-3579 no Feature Editor if features not shown
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2020-03-31 gmungocMerge branch 'develop' into Jalview-JS/develop
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2020-03-31 gmungocJAL-1889 better (?) wait for Conservation thread
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2020-03-31 gmungocJAL-3210 JAL-3130 merge changes to JSON processing
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2020-03-31 gmungocMerge branch 'develop' into Jalview-JS/develop
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2020-03-30 gmungocMerge branch 'Jalview-JS/develop' of https://source...
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2020-03-30 gmungocJAL-3210 debug logging commented out
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2020-03-30 gmungocJAL-3210 test updated for changed signature of SequenceI...
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2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop
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2020-03-19 gmungocMerge branch 'develop' of https://source.jalview.org...
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2020-03-19 gmungocJAL-3305 don't propagate an empty SelectionGroup to...
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2020-03-16 gmungocJAL-3551 tidying, improved commands, fix Jmol model...
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2020-03-16 gmungocJAL-3551 the correct PyMOL colour by chain command
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2020-03-13 gmungocJAL-3551 working proof of concept of Jalview driving...
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2020-03-09 gmungocMerge branch 'develop' into feature/JAL-2422ChimeraX
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2020-03-09 gmungocJAL-3528 unit tests added for failed lookup, Javadoc
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2020-03-09 gmungocJAL-3407 3549 in release notes
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2020-03-09 gmungocJAL-3549 JAL-3305 no Sort By Score / Density if no...
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2020-03-09 gmungocJAL-3412 update layout whenever desired id width changes
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2020-03-06 gmungocMerge branch 'develop' of https://source.jalview.org...
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2020-03-06 gmungocJAL-3187 unit test for findComplementFeaturesAtResidue
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2020-03-06 gmungocJAL-3407 added 3468 to release notes
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2020-03-06 gmungocMerge branch 'feature/JAL-3468featureDescriptionEllipsis...
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2020-03-06 gmungocJAL-3468 i18n and additional unit tests
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2020-03-06 gmungocJAL-3407 release note tweaks, added 3533 3538 3534...
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2020-03-03 gmungocJAL-3158 superseded superposeStructures methods removed
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2020-03-03 gmungocJAL-3518 more pull up / test coverage of structure...
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2020-02-29 gmungocJAL-3518 correct override for ChimeraX colour by residues
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2020-02-28 gmungocJAL-3518 basic refactoring / pull up of superposeStructures...
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2020-02-21 gmungocJAL-3518 more extraction of ChimeraX commands as overrides
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2020-02-21 gmungocJAL-2422 tidy of methods and parameters
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2020-02-21 gmungocJAL-2422 general pull-up/removal of common or unused...
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2020-02-20 gmungocJAL-3187 repaint complement after loading on features
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2020-02-20 gmungocJAL-2422 pull-up refactoring of structure commands...
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2020-02-18 Mungo CarstairsJAL-3536 JAL-3187 don't create duplicate CDS-to-protein...
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2020-02-04 gmungocJAL-2422 remove temporary debug code
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2020-02-04 gmungocJAL-2422 fixed stopProgressBar (broken in pull up refactoring)
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2020-02-04 gmungocJAL-2422 pull up refactoring in preparation for ChimeraX...
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2020-01-31 gmungocJAL-2422 temporary hacks removed; use hex colours for...
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