sources/multicoil/data64.log

   1
   2 Input file is murine.seq
   3
   4 Scores by MultiCoil.
   5 The probability cutoff for the coiled-coil locater is 0.50.
   6 The scoring distances are:
   7         For dimeric table: 2 3 4
   8         For trimeric table: 1 2 3
   9
  10
  11 1       P1;J02255_3,
  12         Moloney murine leukemia virus, complete genome. env polyprotein,
  13   Maximum coiled-coil residue probability: 0.988 in position 538.
  14   Maximum dimeric residue probability:     0.059 in position 503.
  15   Maximum trimeric residue probability:    0.967 in position 531.
  16
  17
  18 Res    1 0123456789012345678901234567890123456789012345678901234567890123456789
  19 Sequence MARSTLSKPLKNKVNPRGPLIPLILLMLRGVSTASPGSSPHQVYNITWEVTNGDRETVWATSGNHPLWTW
  20 Dimer    ......................................................................
  21 Trimer   ......................................................................
  22 Coil     ......................................................................
  23
  24 Res   71 0123456789012345678901234567890123456789012345678901234567890123456789
  25 Sequence WPDLTPDLCMLAHHGPSYWGLEYQSPFSSPPGPPCCSGGSSPGCSRDCEEPLTSLTPRCNTAWNRLKLDQ
  26 Dimer    ......................................................................
  27 Trimer   ......................................................................
  28 Coil     ......................................................................
  29
  30 Res  141 0123456789012345678901234567890123456789012345678901234567890123456789
  31 Sequence TTHKSNEGFYVCPGPHRPRESKSCGGPDSFYCAYWGCETTGRAYWKPSSSWDFITVNNNLTSDQAVQVCK
  32 Dimer    ......................................................................
  33 Trimer   ......................................................................
  34 Coil     ......................................................................
  35
  36 Res  211 0123456789012345678901234567890123456789012345678901234567890123456789
  37 Sequence DNKWCNPLVIRFTDAGRRVTSWTTGHYWGLRLYVSGQDPGLTFGIRLRYQNLGPRVPIGPNPVLADQQPL
  38 Dimer    ......................................................................
  39 Trimer   ......................................................................
  40 Coil     ......................................................................
  41
  42 Res  281 0123456789012345678901234567890123456789012345678901234567890123456789
  43 Sequence SKPKPVKSPSVTKPPSGTPLSPTQLPPAGTENRLLNLVDGAYQALNLTSPDKTQECWLCLVAGPPYYEGV
  44 Dimer    ......................................................................
  45 Trimer   ......................................................................
  46 Coil     ......................................................................
  47
  48 Res  351 0123456789012345678901234567890123456789012345678901234567890123456789
  49 Sequence AVLGTYSNHTSAPANCSVASQHKLTLSEVTGQGLCIGAVPKTHQALCNTTQTSSRGSYYLVAPTGTMWAC
  50 Dimer    ......................................................................
  51 Trimer   ......................................................................
  52 Coil     ......................................................................
  53
  54 Res  421 0123456789012345678901234567890123456789012345678901234567890123456789
  55 Sequence STGLTPCISTTILNLTTDYCVLVELWPRVTYHSPSYVYGLFERSNRHKREPVSLTLALLLGGLTMGGIAA
  56 Dimer    ......................................................................
  57 Trimer   ......................................................................
  58 Coil     ......................................................................
  59
  60 Res  491 0123456789012345678901234567890123456789012345678901234567890123456789
  61 Sequence GIGTGTTALMATQQFQQLQAAVQDDLREVEKSISNLEKSLTSLSEVVLQNRRGLDLLFLKEGGLCAALKE
  62 Dimer    ......................................................................
  63 Trimer   ..........gabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcd.............
  64 Coil     ..........gabcdefgabcdefgabcdefgabcdefgabcdefgabcdefgabcd.............
  65
  66 Res  561 0123456789012345678901234567890123456789012345678901234567890123456789
  67 Sequence ECCFYADHTGLVRDSMAKLRERLNQRQKLFESTQGWFEGLFNRSPWFTTLISTIMGPLIVLLMILLFGPC
  68 Dimer    ......................................................................
  69 Trimer   ......................................................................
  70 Coil     ......................................................................
  71
  72 Res  631 01234567890123456789012345678901234
  73 Sequence ILNRLVQFVKDRISVVQALVLTQQYHQLKPIEYEP
  74 Dimer    ...................................
  75 Trimer   ...................................
  76 Coil     ...................................
  77
  78
  79 Trim    0.93@ 501- 547:g,3
  80 Coil    0.96@ 501- 547:g,3