fix data report, protein report
[proteocache.git] / server / compbio / listeners / ServletSequenceProtein.java
1 package compbio.listeners;
2
3 import java.io.IOException;
4
5 import javax.servlet.RequestDispatcher;
6 import javax.servlet.ServletException;
7 import javax.servlet.annotation.WebServlet;
8 import javax.servlet.http.HttpServlet;
9 import javax.servlet.http.HttpServletRequest;
10 import javax.servlet.http.HttpServletResponse;
11
12 import compbio.statistic.CassandraRequester;
13 import compbio.statistic.StatisticsProt;
14
15 /**
16  * Servlet implementation class ProtServlet
17  */
18 @WebServlet("/ServletSequenceProtein")
19 public class ServletSequenceProtein extends HttpServlet {
20         private static final long serialVersionUID = 1L;
21
22         /**
23          * @see HttpServlet#doGet(HttpServletRequest request, HttpServletResponse
24          *      response)
25          */
26         protected void doGet(HttpServletRequest request, HttpServletResponse response) throws ServletException, IOException {
27                 final long startTime = System.currentTimeMillis();
28                 String flag = request.getParameter("protein");
29                 String prot = request.getParameter("prot");
30                 String search = request.getParameter("Search");
31                 int counter = Integer.parseInt(request.getParameter("counterJob"));
32                 CassandraRequester cr = new CassandraRequester();
33                 if (search.equals("Search counter")) {
34         //              request.setAttribute("result", sp.readProtID(counter));
35                 } else {
36                                 request.setAttribute("result", cr.readProteins(prot, flag));
37                 }
38                 final long endTime = System.currentTimeMillis();
39                 request.setAttribute("timeExecution", (endTime - startTime));
40                 request.setAttribute("prot", prot);
41                 request.setAttribute("flag", flag);
42                 request.setAttribute("search", search);
43                 request.setAttribute("counter", counter);
44                 RequestDispatcher rd = request.getRequestDispatcher("/ReportSequenceProtein.jsp");
45                 rd.forward(request, response);
46         }
47
48         /**
49          * @see HttpServlet#doPost(HttpServletRequest request, HttpServletResponse
50          *      response)
51          */
52         protected void doPost(HttpServletRequest request, HttpServletResponse response) throws ServletException, IOException {
53                 doGet(request, response);
54         }
55
56 }