server/compbio/listeners/ServletSequenceProtein.java

   1 package compbio.listeners;
   2
   3 import java.io.IOException;
   4 import java.util.List;
   5
   6 import javax.servlet.RequestDispatcher;
   7 import javax.servlet.ServletException;
   8 import javax.servlet.annotation.WebServlet;
   9 import javax.servlet.http.HttpServlet;
  10 import javax.servlet.http.HttpServletRequest;
  11 import javax.servlet.http.HttpServletResponse;
  12
  13 import compbio.cassandra.DataBase;
  14 import compbio.statistic.CassandraRequester;
  15
  16 /**
  17  * Servlet implementation class ProtServlet
  18  */
  19 @WebServlet("/ServletSequenceProtein")
  20 public class ServletSequenceProtein extends HttpServlet {
  21         private static final long serialVersionUID = 1L;
  22
  23         /**
  24          * @see HttpServlet#doGet(HttpServletRequest request, HttpServletResponse
  25          *      response)
  26          */
  27         protected void doGet(HttpServletRequest request, HttpServletResponse response) throws ServletException, IOException {
  28                 final long startTime = System.currentTimeMillis();
  29                 String flag = request.getParameter("protein");
  30                 String prot = request.getParameter("prot");
  31                 String search = request.getParameter("Search");
  32                 int counter = Integer.parseInt(request.getParameter("counterJob"));
  33                 CassandraRequester cr = new CassandraRequester();
  34                 if (search.equals("Search counter")) {
  35         //              List<DataBase> r = cr.readProteinByCounter(counter);
  36 //                      request.setAttribute("results", r);
  37         //              System.out.println ("Search counter: " + r.size() + " proteins found");
  38                 } else {
  39                 //      List<DataBase> r = cr.readProteins(prot, flag);
  40                 //      request.setAttribute("results", r);
  41                 //      System.out.println ("Search sequence: " + r.size() + " proteins found");
  42                 }
  43                 final long endTime = System.currentTimeMillis();
  44                 request.setAttribute("timeExecution", (endTime - startTime));
  45                 request.setAttribute("prot", prot);
  46                 request.setAttribute("flag", flag);
  47                 request.setAttribute("search", search);
  48                 request.setAttribute("counter", counter);
  49                 RequestDispatcher rd = request.getRequestDispatcher("/ReportSequenceProtein.jsp");
  50                 rd.forward(request, response);
  51         }
  52
  53         /**
  54          * @see HttpServlet#doPost(HttpServletRequest request, HttpServletResponse
  55          *      response)
  56          */
  57         protected void doPost(HttpServletRequest request, HttpServletResponse response) throws ServletException, IOException {
  58                 doGet(request, response);
  59         }
  60
  61 }