webapp/view/reportProteinSequences.jsp

   1 <%@ page language="java" contentType="text/html; charset=UTF-8" pageEncoding="UTF-8"%>
   2 <!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
   3 <%@ page trimDirectiveWhitespaces="true"%>
   4 <%@ taglib uri="http://www.springframework.org/tags" prefix="spring"%>
   5 <%@ taglib uri="http://java.sun.com/jsp/jstl/core" prefix="c"%>
   6 <%@ taglib uri="http://java.sun.com/jsp/jstl/functions" prefix="fn"%>
   7 <%@ taglib uri="http://java.sun.com/jsp/jstl/fmt" prefix="fmt"%>
   8 <%@page import="java.util.ArrayList"%>
   9
  10 <html>
  11 <jsp:include page="fragments/header.jsp" />
  12 <body>
  13         <div class="container">
  14                 <jsp:include page="fragments/mainmenu.jsp" />
  15                 <spring:url value="/sequence/query" var="searchquery" />
  16                 <spring:url value="/joblog/query" var="jobquery" />
  17
  18                 <c:choose>
  19                         <c:when test="${flag == 'whole'}">
  20                                 <p style="font-weight:bold;">Jobs for the protein sequence: ${prot}</p>
  21                         </c:when>
  22                         <c:otherwise>
  23                                 <p style="font-weight:bold;">Jobs for the protein sequences, which include the substring:
  24                                         ${prot}</p>
  25                         </c:otherwise>
  26                 </c:choose>
  27                 <!-- <h3>Time execution: ${timeExecution} ms</h3>-->
  28
  29                 <c:choose>
  30                         <c:when test="${njobs == 0}">
  31                                 <p>No jobs found</p>
  32                         </c:when>
  33                         <c:otherwise>
  34                                 <p>${njobs} jobs found</p>
  35                                 <div class="table-responsive">
  36                                         <table class="table table-striped table-hover table-bordered">
  37                                                 <thead>
  38                                                         <tr>
  39                                                                 <th>Job ID</th>
  40                                                                 <th>annotation</th>
  41                                                                 <th>Sequence</th>
  42                                                         </tr>
  43                                                 </thead>
  44                                                 <tbody>
  45                                                         <c:forEach items="${results}" var="res" varStatus="status">
  46                                                                 <c:set var="ann" value="${res.predictions}" />
  47                                                                 <tr>
  48                                                                         <th rowspan="${ann.mapsize + 2}"><a
  49                                                                                 title="Click to view the job log"
  50                                                                                 href="${jobquery}?IdJob=${res.id}">${res.id}</a></th>
  51                                                                 </tr>
  52                                                                 <tr>
  53                                                                         <td
  54                                                                                 style="text-align: center; font-weight: bold; font-family: monospace">Protein
  55                                                                                 Sequence</td>
  56                                                                         <c:if test="${flag == 'whole'}">
  57                                                                                 <td
  58                                                                                         style="text-align: left; border-buttom: dotted; font-family: monospace"><c:out
  59                                                                                                 value="${res.prot}" /></td>
  60                                                                         </c:if>
  61                                                                         <c:if test="${flag == 'part'}">
  62                                                                                 <td
  63                                                                                         style="text-align: left; border-buttom: dotted; font-family: monospace">
  64                                                                                         <c:forEach items="${res.subProt}" var="seq">
  65                                                                                                 <c:choose>
  66                                                         <c:when test="${fn:contains(seq, prot)}">
  67                                                         <span style="background-color: blue">${seq}</span></c:when>
  68                                                         <c:otherwise>${seq}</c:otherwise>
  69                                                                                                 </c:choose>
  70                                                                                         </c:forEach>
  71                                                                                 </td>
  72                                                                         </c:if>
  73                                                                 </tr>
  74                                                                 <c:forEach items="${ann.predictions}" var="seq"
  75                                                                         varStatus="status">
  76                                                                         <tr>
  77                                                                                 <td
  78                                                                                         style="text-align: center; font-weight: bold; font-family: monospace"><c:out
  79                                                                                                 value="${seq.key}" /></td>
  80                                                                                 <td
  81                                                                                         style="text-align: left; border-buttom: dotted; font-family: monospace"><c:out
  82                                                                                                 value="${seq.value}" /></td>
  83                                                                         </tr>
  84                                                                 </c:forEach>
  85                                                         </c:forEach>
  86                                                 </tbody>
  87                                         </table>
  88                                 </div>
  89                         </c:otherwise>
  90                 </c:choose>
  91
  92                 <jsp:include page="fragments/footer.jsp" />
  93         </div>
  94 </body>
  95 </html>