webapp/view/reportProteinSequences.jsp

   1 <%@ page language="java" contentType="text/html; charset=UTF-8" pageEncoding="UTF-8"%>
   2 <!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
   3 <%@ page trimDirectiveWhitespaces="true"%>
   4 <%@ taglib uri="http://www.springframework.org/tags" prefix="spring"%>
   5 <%@ taglib uri="http://java.sun.com/jsp/jstl/core" prefix="c"%>
   6 <%@ taglib uri="http://java.sun.com/jsp/jstl/functions" prefix="fn"%>
   7 <%@ taglib uri="http://java.sun.com/jsp/jstl/fmt" prefix="fmt"%>
   8 <%@page import="java.util.ArrayList"%>
   9
  10 <html>
  11 <jsp:include page="fragments/header.jsp" />
  12 <body>
  13         <div class="container">
  14                 <jsp:include page="fragments/mainmenu.jsp" />
  15                 <spring:url value="/sequence/query" var="searchquery" />
  16                 <spring:url value="/joblog/query" var="jobquery" />
  17
  18         <div class="panel panel-default">
  19         <div class="panel-heading">
  20
  21                 <c:choose>
  22                         <c:when test="${flag == 'whole'}">
  23                                 <p style="font-weight:bold;">Jobs for the protein sequence: ${prot}</p>
  24                         </c:when>
  25                         <c:otherwise>
  26                                 <p style="font-weight:bold;">Jobs for the protein sequences, which include the substring:
  27                                         ${prot}</p>
  28                         </c:otherwise>
  29                 </c:choose>
  30                 <!-- <h3>Time execution: ${timeExecution} ms</h3>-->
  31
  32         </div>
  33         <div class="panel-body">
  34
  35                 <c:choose>
  36                         <c:when test="${njobs == 0}">
  37                                 <p>No jobs found</p>
  38                         </c:when>
  39                         <c:otherwise>
  40                                 <p>${njobs} jobs found</p>
  41                                 <div class="table-responsive">
  42                                         <table class="table table-striped table-hover table-bordered">
  43                                                 <thead>
  44                                                         <tr>
  45                                                                 <th>Job ID</th>
  46                                                                 <th>annotation</th>
  47                                                                 <th>Sequence</th>
  48                                                         </tr>
  49                                                 </thead>
  50                                                 <tbody>
  51                                                         <c:forEach items="${results}" var="res" varStatus="status">
  52                                                                 <c:forEach items="${res.jobid}" var="id" varStatus="status">
  53                                                                 <tr>
  54                                                                         <th rowspan="${res.size + 2}"><a
  55                                                                                 title="Click to view the job log"
  56                                                                                 href="${jobquery}?IdJob=${id}">${id}</a></th>
  57                                                                 </tr>
  58                                                                 <tr>
  59                                                                         <td
  60                                                                                 style="text-align: center; font-weight: bold; font-family: monospace">Protein
  61                                                                                 Sequence</td>
  62                                                                         <c:if test="${flag == 'whole'}">
  63                                                                                 <td
  64                                                                                         style="text-align: left; border-buttom: dotted; font-family: monospace"><c:out
  65                                                                                                 value="${res.sequence}" /></td>
  66                                                                         </c:if>
  67                                                                         <c:if test="${flag == 'part'}">
  68                                                                                 <td
  69                                                                                         style="text-align: left; border-buttom: dotted; font-family: monospace">
  70                                                                                         <c:forEach items="${res.subProt}" var="seq">
  71                                                                                                 <c:choose>
  72                                                         <c:when test="${fn:contains(seq, prot)}">
  73                                                         <span style="background-color: blue">${seq}</span></c:when>
  74                                                         <c:otherwise>${seq}</c:otherwise>
  75                                                                                                 </c:choose>
  76                                                                                         </c:forEach>
  77                                                                                 </td>
  78                                                                         </c:if>
  79                                                                 </tr>
  80                                                                 <c:forEach items="${res.predictions}" var="seq"
  81                                                                         varStatus="status">
  82                                                                         <tr>
  83                                                                                 <td
  84                                                                                         style="text-align: center; font-weight: bold; font-family: monospace"><c:out
  85                                                                                                 value="${seq.key}" /></td>
  86                                                                                 <td
  87                                                                                         style="text-align: left; border-buttom: dotted; font-family: monospace"><c:out
  88                                                                                                 value="${seq.value}" /></td>
  89                                                                         </tr>
  90                                                                 </c:forEach>
  91                                                         </c:forEach>
  92                                                         </c:forEach>
  93                                                 </tbody>
  94                                         </table>
  95                                 </div>
  96                         </c:otherwise>
  97                 </c:choose>
  98
  99         </div>
 100         </div>
 101
 102                 <jsp:include page="fragments/footer.jsp" />
 103         </div>
 104 </body>
 105 </html>