website/ReportSequenceProtein.jsp

   1 <%@page import="java.util.ArrayList"%>
   2 <%@ page trimDirectiveWhitespaces="true"%>
   3 <%@ taglib uri="http://java.sun.com/jsp/jstl/core" prefix="c"%>
   4 <%@ taglib uri="http://java.sun.com/jsp/jstl/functions" prefix="fn"%>
   5 <%@ taglib uri="http://java.sun.com/jsp/jstl/fmt" prefix="fmt"%>
   6 <%@ taglib uri="http://displaytag.sf.net" prefix="dt"%>
   7 <c:choose>
   8         <c:when test="${search == 'Search counter'}">
   9                 <h3>Dundee ProteoCache query result for jobs more than ${counter} </h3>
  10         </c:when>
  11         <c:otherwise>
  12                 <h3>Dundee ProteoCache query result</h3>
  13         </c:otherwise>
  14 </c:choose>
  15 <h3>Time execution: ${timeExecution} ms</h3>
  16 <table border="1" style="border-collapse: collapse; white-space: nowrap">
  17         <c:choose>
  18                 <c:when test="${search == 'Search counter'}">
  19                         <thead>
  20                                 <tr>
  21                                         <th style="text-align: centre">Number of jobs</th>
  22                                         <th style="text-align: left">Protein</th>
  23                                 </tr>
  24                         </thead>
  25                         <tbody>
  26                                 <c:forEach items="${result}" var="res">
  27                                         <tr>
  28                                                 <td>${res.totalId}</td>
  29                                                 <td
  30                                                         style="text-align: left; border-buttom: dotted; font-family: monospace"><a
  31                                                         title="Click to view predictions"
  32                                                         href="ProtServlet?prot=${res.prot}&protein=whole&Search=Search+sequence&counterJob=${counter}">${res.prot}</a>
  33                                                 </td>
  34                                         </tr>
  35                                 </c:forEach>
  36                 </c:when>
  37                 <c:otherwise>
  38                         <thead>
  39                                 <tr>
  40                                         <th style="text-align: centre">ID</th>
  41                                         <th style="text-align: centre">Prediction</th>
  42                                 </tr>
  43                         </thead>
  44                         <tbody>
  45                                 <c:forEach items="${result}" var="res" varStatus="status">
  46                                         <tr>
  47                                                 <td rowspan="2">${res.id}</td>
  48                                                 <c:if test="${flag == 'whole'}">
  49                                                         <td
  50                                                                 style="text-align: left; border-buttom: dotted; font-family: monospace"><c:out
  51                                                                         value="${res.prot}" /></td>
  52                                                 </c:if>
  53                                                 <c:if test="${flag == 'part'}">
  54                                                         <td
  55                                                                 style="text-align: left; border-buttom: dotted; font-family: monospace">
  56                                                                 <c:forEach items="${res.subProt}" var="seq">
  57                                                                         <c:choose>
  58                                                                                 <c:when test="${fn:contains(seq, prot)}">
  59                                                                                         <span style="background-color: blue">${seq}</span>
  60                                                                                 </c:when>
  61                                                                                 <c:otherwise>${seq}</c:otherwise>
  62                                                                         </c:choose>
  63                                                                 </c:forEach>
  64                                                         </td>
  65                                                 </c:if>
  66                                         </tr>
  67                                         <tr>
  68                                                 <td
  69                                                         style="text-align: left; border-top: hidden; font-family: monospace"><c:out
  70                                                                 value="${res.jpred}" /></td>
  71                                         </tr>
  72                                 </c:forEach>
  73                 </c:otherwise>
  74         </c:choose>
  75         </tbody>
  76 </table>