website/ReportSequenceProtein.jsp

   1 <%@page import="java.util.ArrayList"%>
   2 <%@ page trimDirectiveWhitespaces="true"%>
   3 <%@ taglib uri="http://java.sun.com/jsp/jstl/core" prefix="c"%>
   4 <%@ taglib uri="http://java.sun.com/jsp/jstl/functions" prefix="fn"%>
   5 <%@ taglib uri="http://java.sun.com/jsp/jstl/fmt" prefix="fmt"%>
   6 <%@ taglib uri="http://displaytag.sf.net" prefix="dt"%>
   7 <c:choose>
   8         <c:when test="${search == 'Search counter'}">
   9                 <h3>Dundee ProteoCache query result for jobs more than ${counter} </h3>
  10         </c:when>
  11         <c:otherwise>
  12                 <h3>Dundee ProteoCache query result</h3>
  13         </c:otherwise>
  14 </c:choose>
  15 <h3>Time execution: ${timeExecution} ms</h3>
  16 <c:choose>
  17
  18         <c:when test="${result == null}">
  19                 <h3>No jobs for sequence ${prot} </h3>
  20         </c:when>
  21         <c:otherwise>
  22
  23
  24 <table border="1" style="border-collapse: collapse; white-space: nowrap">
  25         <c:choose>
  26                 <c:when test="${search == 'Search counter'}">
  27                         <thead>
  28                                 <tr>
  29                                         <th style="text-align: centre">Number of jobs</th>
  30                                         <th style="text-align: left">Protein</th>
  31                                 </tr>
  32                         </thead>
  33                         <tbody>
  34                                 <c:forEach items="${result}" var="res">
  35                                         <tr>
  36                                                 <td>${res.totalId}</td>
  37                                                 <td
  38                                                         style="text-align: left; border-buttom: dotted; font-family: monospace"><a
  39                                                         title="Click to view predictions"
  40                                                         href="ServletSequenceProtein?prot=${res.prot}&protein=whole&Search=Search+sequence&counterJob=${counter}">${res.prot}</a>
  41                                                 </td>
  42                                         </tr>
  43                                 </c:forEach>
  44                 </c:when>
  45                 <c:otherwise>
  46                         <thead>
  47                                 <tr>
  48                                         <th style="text-align: centre">ID</th>
  49                                         <th style="text-align: centre">Predictions</th>
  50                                 </tr>
  51                         </thead>
  52                         <tbody>
  53                                 <c:forEach items="${result}" var="res" varStatus="status">
  54                                         <tr>
  55                                                 <td rowspan="2"><a href="ServletLogInfo?IdJob=${res.id}">${res.id}</a></td>
  56                                                 <c:if test="${flag == 'whole'}">
  57                                                         <td
  58                                                                 style="text-align: left; border-buttom: dotted; font-family: monospace"><c:out
  59                                                                         value="${res.prot}" /></td>
  60                                                 </c:if>
  61                                                 <c:if test="${flag == 'part'}">
  62                                                         <td
  63                                                                 style="text-align: left; border-buttom: dotted; font-family: monospace">
  64                                                                 <c:forEach items="${res.subProt}" var="seq">
  65                                                                         <c:choose>
  66                                                                                 <c:when test="${fn:contains(seq, prot)}">
  67                                                                                         <span style="background-color: blue">${seq}</span>
  68                                                                                 </c:when>
  69                                                                                 <c:otherwise>${seq}</c:otherwise>
  70                                                                         </c:choose>
  71                                                                 </c:forEach>
  72                                                         </td>
  73                                                 </c:if>
  74                                         </tr>
  75                                         <tr>
  76                                                 <td
  77                                                         style="text-align: left; border-top: hidden; font-family: monospace"><c:out
  78                                                                 value="${res.jpred}" /></td>
  79                                         </tr>
  80                                 </c:forEach>
  81                 </c:otherwise>
  82         </c:choose>
  83         </tbody>
  84 </table>
  85 </c:otherwise>
  86 </c:choose>