1 package jalview.api.analysis;
3 import jalview.datamodel.AlignmentView;
4 import jalview.math.MatrixI;
6 public interface ScoreModelI
9 * Answers a name for the score model, suitable for display in menus. Names
10 * should be unique across score models in use.
13 * @see jalview.analysis.scoremodels.ScoreModels#forName(String)
18 * Answers true if this model is applicable for nucleotide data (so should be
19 * shown in menus in that context)
26 * Answers true if this model is applicable for peptide data (so should be
27 * shown in menus in that context)