1 package jalview.ext.varna;
3 import fr.orsay.lri.varna.models.rna.RNA;
5 import jalview.datamodel.AlignmentAnnotation;
6 import jalview.datamodel.SequenceI;
9 * Data bean wrapping the data items that define one RNA view
13 public final String title;
15 public final AlignmentAnnotation ann;
17 public final SequenceI seq;
19 public final boolean gapped;
23 // path to a file holding VARNA session state XML
24 public final String varnaSession;
26 public RnaModel(String t, AlignmentAnnotation aa, SequenceI s, RNA r,
35 varnaSession = sessionFile;