src2/fr/orsay/lri/varna/views/VueBPList.java

   1 package fr.orsay.lri.varna.views;
   2
   3 import java.awt.Color;
   4 import java.awt.Dimension;
   5 import java.awt.GridLayout;
   6 import java.awt.event.ActionEvent;
   7 import java.awt.event.ActionListener;
   8 import java.beans.PropertyChangeEvent;
   9 import java.beans.PropertyVetoException;
  10 import java.beans.VetoableChangeListener;
  11 import java.util.ArrayList;
  12 import java.util.Arrays;
  13 import java.util.Collections;
  14 import java.util.Vector;
  15
  16 import javax.swing.DefaultCellEditor;
  17 import javax.swing.JButton;
  18 import javax.swing.JComboBox;
  19 import javax.swing.JOptionPane;
  20 import javax.swing.JPanel;
  21 import javax.swing.JScrollPane;
  22 import javax.swing.JTable;
  23 import javax.swing.event.TableModelEvent;
  24 import javax.swing.event.TableModelListener;
  25 import javax.swing.table.AbstractTableModel;
  26
  27 import fr.orsay.lri.varna.VARNAPanel;
  28 import fr.orsay.lri.varna.components.ActionEditor;
  29 import fr.orsay.lri.varna.components.ActionRenderer;
  30 import fr.orsay.lri.varna.components.ColorRenderer;
  31 import fr.orsay.lri.varna.models.rna.ModeleBase;
  32 import fr.orsay.lri.varna.models.rna.ModeleBaseNucleotide;
  33 import fr.orsay.lri.varna.models.rna.ModeleColorMap;
  34 import fr.orsay.lri.varna.models.rna.ModeleBP;
  35 import fr.orsay.lri.varna.models.rna.RNA;
  36
  37 public class VueBPList extends JPanel implements TableModelListener, ActionListener
  38 {
  39
  40         private JTable table;
  41         private BPTableModel _tm;
  42         private VARNAPanel _vp;
  43         private ArrayList<ModeleBP> data;
  44         private ArrayList<Double> _backup;
  45         private ArrayList<Object> columns;
  46
  47
  48         public enum Actions{
  49                 ACTION_DELETE,
  50                 ACTION_EDIT_STYLE;
  51
  52                 public String toString()
  53                 {
  54                         switch(this)
  55                         {
  56                           case ACTION_DELETE:
  57                                   return "Delete";
  58                           case ACTION_EDIT_STYLE:
  59                                   return "Edit Style";
  60                         }
  61                         return "N/A";
  62                 }
  63         };
  64
  65         public VueBPList(VARNAPanel vp)
  66         {
  67                 super(new GridLayout(1, 0));
  68                 _vp = vp;
  69                 init();
  70         }
  71
  72         private void init()
  73         {
  74                 Object[] col = {"Sec.Str.","5' partner","3' partner","5' edge","3' edge","Orientation","Remove"};
  75                 columns = new ArrayList<Object>();
  76                 for (int i = 0; i < col.length; i++)
  77                 {
  78                         columns.add(col[i]);
  79                 }
  80
  81                 _backup = new ArrayList<Double>();
  82                 data = new ArrayList<ModeleBP>();
  83                 for (ModeleBP ms: _vp.getRNA().getAllBPs())
  84                 {
  85                         data.add(ms);
  86                 }
  87                 Collections.sort(data);
  88                 _tm = new BPTableModel();
  89                 table = new JTable(_tm);
  90
  91                 table.setDefaultRenderer(Color.class, new ColorRenderer(true));
  92                 table.setDefaultRenderer(Actions.class, new ActionRenderer());
  93
  94                 table.setDefaultEditor(ModeleBP.Edge.class, new DefaultCellEditor(new JComboBox(ModeleBP.Edge.values())));
  95                 table.setDefaultEditor(ModeleBP.Stericity.class, new DefaultCellEditor(new JComboBox(ModeleBP.Stericity.values())));
  96                 table.setDefaultEditor(Actions.class, new ActionEditor(this));
  97
  98                 table.setPreferredScrollableViewportSize(new Dimension(500, 500));
  99                 table.getModel().addTableModelListener(this);
 100
 101                 table.setRowHeight(25);
 102
 103                 JScrollPane scrollPane = new JScrollPane(table);
 104                 add(scrollPane);
 105                 setOpaque(true); // content panes must be opaque
 106                 this.doLayout();
 107
 108                 JOptionPane.showMessageDialog(_vp, this, "Base pairs Edition", JOptionPane.PLAIN_MESSAGE);
 109
 110         }
 111
 112         public void cancelChanges()
 113         {
 114                 for (int i = 0; i < _vp.getRNA().get_listeBases().size(); i++)
 115                 {
 116                         ModeleBase mb = _vp.getRNA().get_listeBases().get(i);
 117                         mb.setValue(_backup.get(i));
 118                 }
 119           _vp.getRNA().rescaleColorMap(_vp.getColorMap());
 120         }
 121
 122         private class BPTableModel extends AbstractTableModel {
 123             /**
 124                  *
 125                  */
 126                 private static final long serialVersionUID = 1L;
 127                 public String getColumnName(int col) {
 128                 return columns.get(col).toString();
 129             }
 130             public int getRowCount() { return data.size(); }
 131             public int getColumnCount() { return columns.size(); }
 132             public Object getValueAt(int row, int col) {
 133                 ModeleBP mb = data.get(row);
 134                 if (col==0)
 135                 {
 136                         return new Boolean(mb.getPartner3().getElementStructure()==mb.getPartner5().getIndex());
 137                 }
 138                 else if (col==1)
 139                 {
 140                         return new String(""+mb.getPartner5().getBaseNumber()+"-"+mb.getPartner5().getContent());
 141                 }
 142                 else if (col==2)
 143                 {
 144                         return new String(""+mb.getPartner3().getBaseNumber()+"-"+mb.getPartner3().getContent());
 145                 }
 146                 else if (col==3)
 147                 {
 148                         return mb.getEdgePartner5();
 149                 }
 150                 else if (col==4)
 151                 {
 152                         return mb.getEdgePartner3();
 153                 }
 154                 else if (col==5)
 155                 {
 156                         return mb.getStericity();
 157                 }
 158                 else if (col==6)
 159                 {
 160                         return Actions.ACTION_DELETE;
 161                 }
 162                 return "N/A";
 163             }
 164             public boolean isCellEditable(int row, int col)
 165                 {
 166                         if ( col == 3 || col ==4 || col ==5 || col ==6)
 167                                 return true;
 168                         return false;
 169                 }
 170             public void setValueAt(Object value, int row, int col) {
 171                 if ( col == 3 || col ==4 || col ==5)
 172                 {
 173                         ModeleBP mb = data.get(row);
 174                         if ( col == 3)
 175                         {
 176                           mb.setEdge5((ModeleBP.Edge)value);
 177                         }
 178                         else if ( col == 4)
 179                         {
 180                                   mb.setEdge3((ModeleBP.Edge)value);
 181                         }
 182                         else if ( col == 5)
 183                         {
 184                                   mb.setStericity((ModeleBP.Stericity)value);
 185                         }
 186                   fireTableCellUpdated(row, col);
 187                   _vp.repaint();
 188
 189                 }
 190             }
 191
 192             public Class getColumnClass(int c) {
 193                 return getValueAt(0, c).getClass();
 194             }
 195         }
 196
 197         public void tableChanged(TableModelEvent e) {
 198                 if (e.getType() == TableModelEvent.UPDATE)
 199                 {
 200                         table.repaint();
 201                 }
 202
 203         }
 204
 205         public void actionPerformed(ActionEvent arg0) {
 206                 //System.out.println(""+arg0.toString());
 207                 String[] data2 = arg0.getActionCommand().split("-");
 208                 int row = Integer.parseInt(data2[data2.length-1]);
 209                 if (data2[0].equals("Delete"))
 210                 {
 211                         ModeleBP ms = data.get(row);
 212                         _vp.getVARNAUI().UIRemoveBP(ms);
 213
 214
 215                         data.remove(row);
 216
 217                         _tm.fireTableRowsDeleted(row, row);
 218                 }
 219         }
 220
 221 }