sm = new ScoreMatrix("Test", "AB".toCharArray(), scores);
assertFalse(sm.isSymmetric()); // [0, 1] != [1, 0]
res1 = sm.findSimilarities(seqs1, params);
sm = new ScoreMatrix("Test", "AB".toCharArray(), scores);
assertFalse(sm.isSymmetric()); // [0, 1] != [1, 0]
res1 = sm.findSimilarities(seqs1, params);