- assertTrue(
- "Couldn't find sequence associated annotation "
- + aa.label
- + " on the sequence it is associated with.\nSequence associated editing will fail.",
+ assertTrue("Couldn't find sequence associated annotation "
+ + aa.label
+ + " on the sequence it is associated with.\nSequence associated editing will fail.",
String inFile = "examples/1gaq.txt";
String tfile = File.createTempFile("JalviewTest", ".jvp")
.getAbsolutePath();
String inFile = "examples/1gaq.txt";
String tfile = File.createTempFile("JalviewTest", ".jvp")
.getAbsolutePath();
- AlignFrame af = new jalview.io.FileLoader().LoadFileWaitTillLoaded(
- inFile, DataSourceType.FILE);
+ AlignFrame af = new jalview.io.FileLoader()
+ .LoadFileWaitTillLoaded(inFile, DataSourceType.FILE);
assertTrue("Didn't read input file " + inFile, af != null);
af.saveAlignment(tfile, FileFormat.Jalview);
assertTrue("Failed to store as a project.",
assertTrue("Didn't read input file " + inFile, af != null);
af.saveAlignment(tfile, FileFormat.Jalview);
assertTrue("Failed to store as a project.",
- assertEquals("Expected only one PDB ID", 1, sq.getAllPDBEntries()
- .size());
+ assertEquals("Expected only one PDB ID", 1,
+ sq.getAllPDBEntries().size());
boolean exists = false, found = false;
for (AlignmentAnnotation ana : sq.getAnnotation())
{
boolean exists = false, found = false;
for (AlignmentAnnotation ana : sq.getAnnotation())
{
- assertTrue("Couldn't find any annotation for " + pdbentry.getId()
- + " (file handle " + pdbentry.getFile() + ")", found);
+ assertTrue(
+ "Couldn't find any annotation for " + pdbentry.getId()
+ + " (file handle " + pdbentry.getFile() + ")",
+ found);