- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
assertNotNull(_rc);
AlignFrame alf = new jalview.io.FileLoader(false)
.LoadFileWaitTillLoaded("examples/testdata/smad.fa",
assertNotNull(_rc);
AlignFrame alf = new jalview.io.FileLoader(false)
.LoadFileWaitTillLoaded("examples/testdata/smad.fa",
assertNotNull("Couldn't find test data.", alf);
alf.loadJalviewDataFile("examples/testdata/smad_groups.jva",
assertNotNull("Couldn't find test data.", alf);
alf.loadJalviewDataFile("examples/testdata/smad_groups.jva",
assertTrue(
"Couldn't load the test data's annotation file (should be 5 groups but found "
+ alf.getViewport().getAlignment().getGroups().size()
assertTrue(
"Couldn't load the test data's annotation file (should be 5 groups but found "
+ alf.getViewport().getAlignment().getGroups().size()
RestClient rc = new RestClient(_rc.service, alf, true);
assertNotNull("Couldn't creat RestClient job.", rc);
RestClient rc = new RestClient(_rc.service, alf, true);
assertNotNull("Couldn't creat RestClient job.", rc);
RestJob rjb = new RestJob(0, new RestJobThread(rc),
rc.av.getAlignment(), null);
rjb.setAlignmentForInputs(rc.service.getInputParams().values(),
RestJob rjb = new RestJob(0, new RestJobThread(rc),
rc.av.getAlignment(), null);
rjb.setAlignmentForInputs(rc.service.getInputParams().values(),
- throw new Error("Failed to create service from '"
- + fromservicetostring + "'.\n"
- + newService.getInvalidMessage());
+ throw new Error(
+ "Failed to create service from '" + fromservicetostring
+ + "'.\n" + newService.getInvalidMessage());