tidying for 2.5 release

[jalview.git] / build.xml

diff --git a/build.xml b/build.xml
index cc512f6..b73c910 100755 (executable)
--- a/build.xml
+++ b/build.xml
@@ -1,4 +1,21 @@
 <?xml version="1.0"?>
+<!--
+   * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
+   * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+   * 
+   * This file is part of Jalview.
+   * 
+   * Jalview is free software: you can redistribute it and/or
+   * modify it under the terms of the GNU General Public License 
+   * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+   * 
+   * Jalview is distributed in the hope that it will be useful, but 
+   * WITHOUT ANY WARRANTY; without even the implied warranty 
+   * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+   * PURPOSE.  See the GNU General Public License for more details.
+   * 
+   * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+-->
 <project name="jalviewX" default="usage" basedir=".">
        <!-- we use jalopy to format our sources -->
        <taskdef name="jalopy"
@@ -24,6 +41,7 @@
                <echo message="makeApplet - compiles, then packages and obfuscates the Applet"/>
                <echo message="See docs/building.html and the comments in build file for other targets."/>
            <echo message="note: compile and makeApplet require the property java118.home to be set to point to a java 1.1.8 jdk."/>
+           <echo message="Useful -D flags: -Ddonotobfuscate will prevent applet obfuscation"/>
        </target>
 
 
@@ -246,6 +264,7 @@
                                </fileset>
                                <fileset dir="${packageDir}">
                                        <include name="*.jar"/>
+                                       <include name="*_*.jar"/>
                                        <exclude name="jalview.jar"/>
                                </fileset>
                                <property name="jalview.version" value="${JALVIEW_VERSION}"/>