JAL-845 implement alignment of protein to match cDNA alignment

[jalview.git] / src / jalview / api / AlignmentViewPanel.java

diff --git a/src/jalview/api/AlignmentViewPanel.java b/src/jalview/api/AlignmentViewPanel.java
index 7ff3a6a..ae9399d 100644 (file)
--- a/src/jalview/api/AlignmentViewPanel.java
+++ b/src/jalview/api/AlignmentViewPanel.java
@@ -32,6 +32,8 @@ import jalview.structure.StructureSelectionManager;
 public interface AlignmentViewPanel extends OOMHandlerI
 {
 
+  AlignViewportI getAlignViewport();
+
   AlignmentI getAlignment();
 
   StructureSelectionManager getStructureSelectionManager();
@@ -50,4 +52,14 @@ public interface AlignmentViewPanel extends OOMHandlerI
    * ensuring the alignment is still visible.
    */
   void adjustAnnotationHeight();
+
+  FeatureRenderer getFeatureRenderer();
+
+  FeatureRenderer cloneFeatureRenderer();
+  
+  /**
+   * 
+   * @return displayed name for the view
+   */
+  String getViewName();
 }