JAL-1681 show cDNA consensus on protein alignment - first version

[jalview.git] / src / jalview / datamodel / AlignmentAnnotation.java

diff --git a/src/jalview/datamodel/AlignmentAnnotation.java b/src/jalview/datamodel/AlignmentAnnotation.java
index 0d99155..f8782e7 100755 (executable)
--- a/src/jalview/datamodel/AlignmentAnnotation.java
+++ b/src/jalview/datamodel/AlignmentAnnotation.java
@@ -40,6 +40,15 @@ import java.util.Map.Entry;
  */
 public class AlignmentAnnotation
 {
+  /*
+   * Identifers for different types of profile data
+   */
+  public static final int SEQUENCE_PROFILE = 0;
+
+  public static final int STRUCTURE_PROFILE = 1;
+
+  public static final int CDNA_PROFILE = 2;
+
   /**
    * If true, this annotations is calculated every edit, eg consensus, quality
    * or conservation graphs