source.jalview.org Git - jalview.git/commit

author	gmungoc <g.m.carstairs@dundee.ac.uk>
	Tue, 10 Mar 2015 11:44:42 +0000 (11:44 +0000)
committer	gmungoc <g.m.carstairs@dundee.ac.uk>
	Tue, 10 Mar 2015 11:44:42 +0000 (11:44 +0000)
commit	bfb4b56a77352694f4bc445ec31851bbdcdce140
tree	0c99ba6e9c914900bdea4c21dccca5d491c48907	tree \| snapshot
parent	286715d8408510556366a454a748daf8f60444f1	commit \| diff

JAL-1681 show cDNA consensus on protein alignment - first version

20 files changed:

src/jalview/analysis/AAFrequency.java		diff \| blob \| history
src/jalview/analysis/CodingUtils.java	[new file with mode: 0644]	blob
src/jalview/analysis/StructureFrequency.java		diff \| blob \| history
src/jalview/api/AlignViewportI.java		diff \| blob \| history
src/jalview/datamodel/AlignedCodonFrame.java		diff \| blob \| history
src/jalview/datamodel/AlignmentAnnotation.java		diff \| blob \| history
src/jalview/gui/AlignFrame.java		diff \| blob \| history
src/jalview/gui/SplitFrame.java		diff \| blob \| history
src/jalview/renderer/AnnotationRenderer.java		diff \| blob \| history
src/jalview/util/Format.java		diff \| blob \| history
src/jalview/util/MappingUtils.java		diff \| blob \| history
src/jalview/viewmodel/AlignmentViewport.java		diff \| blob \| history
src/jalview/workers/AlignCalcManager.java		diff \| blob \| history
src/jalview/workers/ComplementConsensusThread.java	[new file with mode: 0644]	blob
src/jalview/workers/ConsensusThread.java		diff \| blob \| history
test/jalview/analysis/AAFrequencyTest.java		diff \| blob \| history
test/jalview/analysis/CodingUtilsTest.java	[new file with mode: 0644]	blob
test/jalview/datamodel/AlignedCodonFrameTest.java		diff \| blob \| history
test/jalview/datamodel/AlignmentTest.java		diff \| blob \| history
test/jalview/util/MappingUtilsTest.java		diff \| blob \| history