AlignmentI tdbAl = fl.readFile(tdbURL, DataSourceType.URL,
FileFormat.MMCif);
- // TODO: pad structure according to its Uniprot Start so all line up w.r.t. the Uniprot reference sequence
- // TODO: give the structure a sensible name (not the giant URL *:o) )
+ // TODO: pad structure according to its Uniprot Start so all line up
+ // w.r.t. the Uniprot reference sequence
+ // TODO: give the structure a sensible name (not the giant URL *:o)
+ // )
if (tdbAl != null)
{
if (allSeqs != null)
}
} catch (Exception x)
{
- Console.warn(
- "Couldn't retrieve 3d-beacons model for uniprot id"
- + searchTerm + " : " + tdbURL,
- x);
+ Console.warn("Couldn't retrieve 3d-beacons model for uniprot id"
+ + searchTerm + " : " + tdbURL, x);
}
}
seqFetcher.parseResult(allSeqs,