}
private void openNewJmol(AlignmentPanel ap, boolean alignAdded,
- PDBEntry[] pdbentrys,
- SequenceI[][] seqs)
+ PDBEntry[] pdbentrys, SequenceI[][] seqs)
{
setProgressIndicator(ap.alignFrame);
jmb = new AppJmolBinding(this, ap.getStructureSelectionManager(),
openNewJmol(ap, alignAdded, pe, seqs);
}
-
void initJmol(String command)
{
jmb.setFinishedInit(false);
jmb.jmolViewer.renderScreenImage(g, width, height);
}
};
- String view = MessageManager.getString("action.view").toLowerCase(Locale.ROOT);
+ String view = MessageManager.getString("action.view")
+ .toLowerCase(Locale.ROOT);
ImageExporter exporter = new ImageExporter(writer,
getProgressIndicator(), type, getTitle());
exporter.doExport(null, this, width, height, view);
try
{
BrowserLauncher // BH 2018
- .openURL("http://wiki.jmol.org");//http://jmol.sourceforge.net/docs/JmolUserGuide/");
+ .openURL("http://wiki.jmol.org");// http://jmol.sourceforge.net/docs/JmolUserGuide/");
} catch (Exception ex)
{
System.err.println("Show Jmol help failed with: " + ex.getMessage());
}
}
}
- else if (jmb == null || jmb.jmolViewer == null || !jmb.isFinishedInit())
+ else if (jmb == null || jmb.jmolViewer == null
+ || !jmb.isFinishedInit())
{
g.setColor(Color.black);
g.fillRect(0, 0, currentSize.width, currentSize.height);