/**
* Constructor which parses the data from a file of some specified type.
*
- * @param inFile
- * Filename to read from.
+ * @param dataObject
+ * Filename, URL or Pasted String to read from.
* @param type
- * What type of file to read from (File, URL)
+ * What type of file to read from (File, URL, Pasted String)
*/
- public AlignFile(String inFile, String type) throws IOException
+ public AlignFile(String dataObject, String type) throws IOException
{
- this(true, inFile, type);
+ this(true, dataObject, type);
}
/**
*
* @param parseImmediately
* if false, need to call 'doParse()' to begin parsing data
- * @param inFile
- * Filename to read from.
+ * @param dataObject
+ * Filename, URL or Pasted String to read from.
* @param type
* What type of file to read from (File, URL)
* @throws IOException
*/
- public AlignFile(boolean parseImmediately, String inFile, String type)
+ public AlignFile(boolean parseImmediately, String dataObject, String type)
throws IOException
{
- super(inFile, type);
+ super(dataObject, type);
initData();
if (parseImmediately)
{