+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.io;
import jalview.api.AlignViewportI;
AlignmentI dataset;
List<AlignmentI> alignments;
+
@Override
public void parse()
{
}
else
{
- dataset = new Alignment(new SequenceI[]
- {});
+ dataset = new Alignment(new SequenceI[] {});
}
boolean parseResult = parse(dataset, null, null, false, true);
}
@Override
- public void addProperties(Alignment al)
+ public void addProperties(AlignmentI al)
{
super.addProperties(al);
if (dataset.getCodonFrames() != null)