import jalview.io.vamsas.DatastoreItem;
import jalview.io.vamsas.DatastoreRegistry;
import jalview.io.vamsas.Rangetype;
+import jalview.project.Jalview2XML;
import jalview.util.MessageManager;
import jalview.viewmodel.AlignmentViewport;
// client data is shared over all app clients
try
{
- jalview.gui.Jalview2XML fromxml = new jalview.gui.Jalview2XML();
+ // jalview.gui.Jalview2XML fromxml = new jalview.gui.Jalview2XML();
+ Jalview2XML fromxml = new Jalview2XML();
fromxml.attemptversion1parse = false;
fromxml.setUniqueSetSuffix("");
fromxml.setObjectMappingTables(vobj2jv, jv2vobj); // mapKeysToString
// user data overrides data shared over all app clients ?
try
{
- jalview.gui.Jalview2XML fromxml = new jalview.gui.Jalview2XML();
+ Jalview2XML fromxml = new Jalview2XML();
fromxml.attemptversion1parse = false;
fromxml.setUniqueSetSuffix("");
fromxml.setSkipList(skipList);
{
try
{
- jalview.gui.Jalview2XML jxml = new jalview.gui.Jalview2XML();
+ Jalview2XML jxml = new Jalview2XML();
jxml.setObjectMappingTables(mapKeysToString(vobj2jv),
mapValuesToString(jv2vobj));
jxml.setSkipList(skipList);