v2

[jalview.git] / src / jalview / renderer / AnnotationRenderer.java

diff --git a/src/jalview/renderer/AnnotationRenderer.java b/src/jalview/renderer/AnnotationRenderer.java
index d56ba54..8694ecd 100644 (file)
--- a/src/jalview/renderer/AnnotationRenderer.java
+++ b/src/jalview/renderer/AnnotationRenderer.java
@@ -502,14 +502,14 @@ public class AnnotationRenderer
         {
           char ss = validRes ? row_annotations[column].secondaryStructure
                   : ' ';
-          //System.out.println(ss);
+          
           if (ss == 'S')
           {
             // distinguish between forward/backward base-pairing
             if (row_annotations[column].displayCharacter.indexOf(')') > -1)
             {
               ss = 's';
-              System.out.println(ss);
+              
             }
           }
            if (ss == 'C')
@@ -517,7 +517,7 @@ public class AnnotationRenderer
             if ((row_annotations[column].displayCharacter.indexOf(']') > -1) || (row_annotations[column].displayCharacter.indexOf('}') > -1))
             {
                 ss = 'c';
-                System.out.println(ss);
+                
             }
           }
           if (!validRes || (ss != lastSS))