v2
authorAnne Menard <menard.annec@gmail.com>
Tue, 10 Jul 2012 14:13:37 +0000 (16:13 +0200)
committerAnne Menard <menard.annec@gmail.com>
Tue, 10 Jul 2012 14:13:37 +0000 (16:13 +0200)
commitc5677e9860106a821a3e6e0429b20ede7b9a732a
tree6e0b6750e353569aea56052dd62d58fb25af0d8a
parenta7f8fa9c06d82efbbdbc6a0bf1054bb21610b353
v2
32 files changed:
.classpath
lib/VARNAv3-9-dev.jar
src/MCview/PDBViewer.java
src/MCview/PDBfile.java
src/jalview/appletgui/AlignFrame.java
src/jalview/datamodel/AlignmentAnnotation.java
src/jalview/datamodel/Annotation.java
src/jalview/datamodel/Sequence.java
src/jalview/datamodel/SequenceI.java
src/jalview/gui/AppVarna.java
src/jalview/gui/AppVarnaBinding.java
src/jalview/gui/AssociatePdbFileWithSeq.java
src/jalview/gui/PopupMenu.java
src/jalview/io/AlignFile.java
src/jalview/io/AppletFormatAdapter.java
src/jalview/io/BLCFile.java
src/jalview/io/ClustalFile.java
src/jalview/io/FastaFile.java
src/jalview/io/FeaturesFile.java
src/jalview/io/JPredFile.java
src/jalview/io/MSFfile.java
src/jalview/io/PIRFile.java
src/jalview/io/PfamFile.java
src/jalview/io/PileUpfile.java
src/jalview/io/RnamlFile.java
src/jalview/io/SimpleBlastFile.java
src/jalview/io/StockholmFile.java
src/jalview/io/TCoffeeScoreFile.java
src/jalview/jbgui/GAlignFrame.java
src/jalview/renderer/AnnotationRenderer.java
src/jalview/schemes/ColourSchemeProperty.java
test/jalview/io/TCoffeeScoreFileTest.java