JAL-958 store normalised flag in jalview project

[jalview.git] / src / jalview / schemabinding / version2 / Tree.java

diff --git a/src/jalview/schemabinding/version2/Tree.java b/src/jalview/schemabinding/version2/Tree.java
old mode 100755 (executable)
new mode 100644 (file)
index 14814cc..7fd6238
--- a/src/jalview/schemabinding/version2/Tree.java
+++ b/src/jalview/schemabinding/version2/Tree.java
@@ -27,46 +27,6 @@ public class Tree implements java.io.Serializable {
     //--------------------------/
 
     /**
-     * Field _width.
-     */
-    private int _width;
-
-    /**
-     * keeps track of state for field: _width
-     */
-    private boolean _has_width;
-
-    /**
-     * Field _height.
-     */
-    private int _height;
-
-    /**
-     * keeps track of state for field: _height
-     */
-    private boolean _has_height;
-
-    /**
-     * Field _xpos.
-     */
-    private int _xpos;
-
-    /**
-     * keeps track of state for field: _xpos
-     */
-    private boolean _has_xpos;
-
-    /**
-     * Field _ypos.
-     */
-    private int _ypos;
-
-    /**
-     * keeps track of state for field: _ypos
-     */
-    private boolean _has_ypos;
-
-    /**
      * Field _fontName.
      */
     private java.lang.String _fontName;
@@ -152,12 +112,54 @@ public class Tree implements java.io.Serializable {
     private boolean _has_currentTree;
 
     /**
-     * Tree ID added for binding tree visualization settings to
-     * vamsas document trees in jalview 2.4.1
+     * Tree ID added for binding tree
+     *  visualization settings to vamsas
+     *  document trees in jalview 2.4.1
+     *  
      */
     private java.lang.String _id;
 
     /**
+     * Field _width.
+     */
+    private int _width;
+
+    /**
+     * keeps track of state for field: _width
+     */
+    private boolean _has_width;
+
+    /**
+     * Field _height.
+     */
+    private int _height;
+
+    /**
+     * keeps track of state for field: _height
+     */
+    private boolean _has_height;
+
+    /**
+     * Field _xpos.
+     */
+    private int _xpos;
+
+    /**
+     * keeps track of state for field: _xpos
+     */
+    private boolean _has_xpos;
+
+    /**
+     * Field _ypos.
+     */
+    private int _ypos;
+
+    /**
+     * keeps track of state for field: _ypos
+     */
+    private boolean _has_ypos;
+
+    /**
      * Field _title.
      */
     private java.lang.String _title;
@@ -328,8 +330,9 @@ public class Tree implements java.io.Serializable {
     /**
      * Returns the value of field 'id'. The field 'id' has the
      * following description: Tree ID added for binding tree
-     * visualization settings to vamsas document trees in jalview
-     * 2.4.1
+     *  visualization settings to vamsas
+     *  document trees in jalview 2.4.1
+     *  
      * 
      * @return the value of field 'Id'.
      */
@@ -713,8 +716,9 @@ public class Tree implements java.io.Serializable {
     /**
      * Sets the value of field 'id'. The field 'id' has the
      * following description: Tree ID added for binding tree
-     * visualization settings to vamsas document trees in jalview
-     * 2.4.1
+     *  visualization settings to vamsas
+     *  document trees in jalview 2.4.1
+     *  
      * 
      * @param id the value of field 'id'.
      */