JAL-1517 update copyright to version 2.8.2

[jalview.git] / src / jalview / ws / jws2 / jabaws2 / Jws2Instance.java

diff --git a/src/jalview/ws/jws2/jabaws2/Jws2Instance.java b/src/jalview/ws/jws2/jabaws2/Jws2Instance.java
index 09f4a48..502f0f0 100644 (file)
--- a/src/jalview/ws/jws2/jabaws2/Jws2Instance.java
+++ b/src/jalview/ws/jws2/jabaws2/Jws2Instance.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
- * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
+ * Copyright (C) 2014 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -14,6 +14,7 @@
  * PURPOSE.  See the GNU General Public License for more details.
  * 
  * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.ws.jws2.jabaws2;
 
@@ -48,6 +49,14 @@ public class Jws2Instance
 
   public String docUrl;
 
+  /**
+   * 
+   * @param hosturl Service endpoint
+   * @param serviceType Category for this service's analysis
+   * @param action text describing their action that service performs (eg 'aligning', 'analysing')
+   * @param description Description from JABAWS registry
+   * @param service JABAWS registry ID for service
+   */
   public Jws2Instance(String hosturl, String serviceType, String action,
           String description, JABAService service)
   {
@@ -173,6 +182,8 @@ public class Jws2Instance
                         : null));
       } catch (Exception ex)
       {
+        System.err.println("Unexpected exception creating JabaParamStore.");
+        ex.printStackTrace();
       }
 
     }
@@ -222,4 +233,9 @@ public class Jws2Instance
   {
     return "java:" + serviceType;
   }
+  jalview.ws.uimodel.AlignAnalysisUIText aaui;
+  public jalview.ws.uimodel.AlignAnalysisUIText getAlignAnalysisUI()
+  {
+    return aaui;
+  }
 }