+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.analysis;
import static org.testng.AssertJUnit.assertFalse;
assertTrue(testee.equals("A12345,"));
assertTrue(testee.equals("A12345?"));
assertTrue(testee.equals("A12345_"));
+ /*
+ * case insensitive matching
+ */
+ assertTrue(testee.equals("a12345"));
/*
* matcher name = target name + word separator...
assertTrue(testee.equals("A12345"));
/*
+ * case insensitive matching
+ */
+ assertTrue(testee.equals("a12345"));
+
+ /*
* miscellaneous failing cases
*/
testee = sequenceIdMatcher.new SeqIdName("A12345");
assertFalse(testee.equals((Object) null));
assertFalse(testee.equals(""));
- assertFalse(testee.equals("a12345"));
assertFalse(testee.equals("A12346|A12345"));
+ /*
+ * case insensitive matching
+ */
+ assertTrue(testee.equals("a12345"));
testee = sequenceIdMatcher.new SeqIdName("A12345?B23456");
assertFalse(testee.equals("B23456"));
testee = sequenceIdMatcher.new SeqIdName("A12345<");
assertFalse(testee.equals("A12345?"));
assertTrue(testee.equals("A12345<")); // bug? inconsistent
+ /*
+ * case insensitive matching
+ */
+ assertTrue(testee.equals("a12345"));
+
+ testee = sequenceIdMatcher.new SeqIdName("UNIPROT|A12345");
+ assertFalse(testee.equals("A12345"));
+ assertFalse(testee.equals("UNIPROT|B98765"));
+ assertFalse(testee.equals("UNIPROT|"));
+ assertTrue(testee.equals("UNIPROT"));
}
}