fileFormat enum wip changes
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Mon, 18 Jul 2016 07:51:24 +0000 (08:51 +0100)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Mon, 18 Jul 2016 07:51:24 +0000 (08:51 +0100)
commit4a5137b64f7ec23db2a09290bfcd392984a52150
treee4b2da12d7941f341e4fb10ebfa17a6f0acf37a1
parent8dd4255a671e95df3fc6d6bc4d5d6b172f682c5d
fileFormat enum wip changes
34 files changed:
src/jalview/gui/AnnotationLabels.java
src/jalview/gui/PopupMenu.java
src/jalview/io/AMSAFile.java
src/jalview/io/AlignFile.java
src/jalview/io/AlignmentFileI.java
src/jalview/io/AppletFormatAdapter.java
src/jalview/io/BLCFile.java
src/jalview/io/ClustalFile.java
src/jalview/io/DBRefFile.java
src/jalview/io/FastaFile.java
src/jalview/io/FeaturesFile.java
src/jalview/io/FileFormat.java
src/jalview/io/FileFormatI.java
src/jalview/io/FormatAdapter.java
src/jalview/io/HtmlFile.java
src/jalview/io/JPredFile.java
src/jalview/io/JSONFile.java
src/jalview/io/MSFfile.java
src/jalview/io/PIRFile.java
src/jalview/io/PfamFile.java
src/jalview/io/PhylipFile.java
src/jalview/io/PileUpfile.java
src/jalview/io/RnamlFile.java
src/jalview/io/SimpleBlastFile.java
src/jalview/io/StockholmFile.java
src/jalview/io/TCoffeeScoreFile.java
src/jalview/io/packed/ParsePackedSet.java
src/jalview/ws/jws1/JPredThread.java
src/jalview/ws/seqfetcher/DbSourceProxyImpl.java
test/jalview/analysis/DnaAlignmentGenerator.java
test/jalview/ext/paradise/TestAnnotate3D.java
test/jalview/ws/jabaws/DisorderAnnotExportImport.java
test/jalview/ws/jabaws/JpredJabaStructExportImport.java
test/jalview/ws/jabaws/RNAStructExportImport.java