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(parent: 08643e7) | patch

author	tcofoegbu <tcnofoegbu@dundee.ac.uk>
	Fri, 14 Aug 2015 15:37:13 +0000 (16:37 +0100)
committer	tcofoegbu <tcnofoegbu@dundee.ac.uk>
	Fri, 14 Aug 2015 15:37:13 +0000 (16:37 +0100)
commit	c7d9dbc9b92889077b91bcdb052032fe33fb269e
tree	8dbb381390c4af86c38551c4cd9c1145c3a90e33	tree \| snapshot
parent	08643e75e18b16562e90e9b42c0b327f9c46226b	commit \| diff

JAL-1831 added changes to allow auto-generation of BioJSON schema from src code

16 files changed:

src/com/github/reinert/jjschema/Attributes.java	[new file with mode: 0755]	blob
src/jalview/io/BioJsHTMLOutput.java		diff \| blob \| history
src/jalview/io/JSONFile.java		diff \| blob \| history
src/jalview/json/binding/biojs/BioJSReleasePojo.java	[moved from src/jalview/json/binding/v1/BioJSReleasePojo.java with 93% similarity]	diff \| blob \| history
src/jalview/json/binding/biojs/BioJSRepositoryPojo.java	[moved from src/jalview/json/binding/v1/BioJSRepositoryPojo.java with 98% similarity]	diff \| blob \| history
src/jalview/json/binding/biojson/v1/AlignmentAnnotationPojo.java	[moved from src/jalview/json/binding/v1/AlignmentAnnotationPojo.java with 66% similarity]	diff \| blob \| history
src/jalview/json/binding/biojson/v1/AlignmentPojo.java	[new file with mode: 0644]	blob
src/jalview/json/binding/biojson/v1/AnnotationPojo.java	[new file with mode: 0644]	blob
src/jalview/json/binding/biojson/v1/AppSettingsPojo.java	[moved from src/jalview/json/binding/v1/AppSettingsPojo.java with 98% similarity]	diff \| blob \| history
src/jalview/json/binding/biojson/v1/JalviewBioJsColorSchemeMapper.java	[new file with mode: 0644]	blob
src/jalview/json/binding/biojson/v1/SequenceFeaturesPojo.java	[moved from src/jalview/json/binding/v1/SequenceFeaturesPojo.java with 51% similarity]	diff \| blob \| history
src/jalview/json/binding/biojson/v1/SequenceGrpPojo.java	[moved from src/jalview/json/binding/v1/SequenceGrpPojo.java with 59% similarity]	diff \| blob \| history
src/jalview/json/binding/biojson/v1/SequencePojo.java	[moved from src/jalview/json/binding/v1/SequencePojo.java with 53% similarity]	diff \| blob \| history
src/jalview/json/binding/v1/AlignmentPojo.java	[deleted file]	blob \| history
src/jalview/json/binding/v1/AnnotationPojo.java	[deleted file]	blob \| history
test/jalview/io/BioJsHTMLOutputTest.java		diff \| blob \| history