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Load pdb file with applet
author
amwaterhouse
<Andrew Waterhouse>
Wed, 30 Nov 2005 18:13:46 +0000
(18:13 +0000)
committer
amwaterhouse
<Andrew Waterhouse>
Wed, 30 Nov 2005 18:13:46 +0000
(18:13 +0000)
src/jalview/bin/JalviewLite.java
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diff --git
a/src/jalview/bin/JalviewLite.java
b/src/jalview/bin/JalviewLite.java
index
1a2ba27
..
8527401
100755
(executable)
--- a/
src/jalview/bin/JalviewLite.java
+++ b/
src/jalview/bin/JalviewLite.java
@@
-240,6
+240,25
@@
public class JalviewLite extends Applet
\r
if(featuresFile!=null)
\r
currentAlignFrame.parseFeaturesFile(featuresFile);
\r
\r
if(featuresFile!=null)
\r
currentAlignFrame.parseFeaturesFile(featuresFile);
\r
+
\r
+ String pdbfile = applet.getParameter("PDBFILE");
\r
+ if(pdbfile!=null)
\r
+ {
\r
+ if(pdbfile.indexOf("://")==-1)
\r
+ pdbfile = getCodeBase() + pdbfile;
\r
+
\r
+ String sequence = applet.getParameter("PDBSEQ");
\r
+
\r
+ if(sequence!=null)
\r
+ {
\r
+ new MCview.AppletPDBViewer(pdbfile, "URL",
\r
+ (Sequence)currentAlignFrame.getAlignViewport().getAlignment().findName(sequence),
\r
+ currentAlignFrame.getSeqcanvas());
\r
+
\r
+
\r
+ }
\r
+
\r
+ }
\r
}
\r
else
\r
{
\r
}
\r
else
\r
{
\r