JAL-1953 start work on storing nodes in a map per tree object instead of

all together in a static map

diff --git a/src/jalview/ext/archaeopteryx/Tree.java b/src/jalview/ext/archaeopteryx/Tree.java
index 12dd8c7..345820d 100644 (file)
--- a/src/jalview/ext/archaeopteryx/Tree.java
+++ b/src/jalview/ext/archaeopteryx/Tree.java
@@ -15,6 +15,10 @@ public class Tree implements TreeI
 {
   private final Phylogeny tree;
 
+  // alternative to static maps in TreeNode
+  // private Map<PhylogenyNode, TreeNodeI> originalNodes = new HashMap<>(500);
+  // private Map<TreeNodeI, PhylogenyNode> wrappedNodes = new HashMap<>(500);
+
   public Tree()
   {
     tree = new Phylogeny();