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JAL-2897 updated unit test for code change
features/JAL-1793VCF
author
gmungoc
<g.m.carstairs@dundee.ac.uk>
Tue, 20 Feb 2018 13:01:36 +0000
(13:01 +0000)
committer
gmungoc
<g.m.carstairs@dundee.ac.uk>
Tue, 20 Feb 2018 13:01:36 +0000
(13:01 +0000)
test/jalview/io/vcf/VCFLoaderTest.java
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diff --git
a/test/jalview/io/vcf/VCFLoaderTest.java
b/test/jalview/io/vcf/VCFLoaderTest.java
index
7099282
..
7e3c0b4
100644
(file)
--- a/
test/jalview/io/vcf/VCFLoaderTest.java
+++ b/
test/jalview/io/vcf/VCFLoaderTest.java
@@
-577,7
+577,7
@@
public class VCFLoaderTest
assertEquals(sf.getBegin(), 1);
assertEquals(sf.getEnd(), 1);
assertEquals(sf.getType(), SequenceOntologyI.SYNONYMOUS_VARIANT);
- assertEquals(sf.getDescription(), "AGT");
+ assertEquals(sf.getDescription(), "agC/agT");
sf = proteinFeatures.get(1);
assertEquals(sf.getFeatureGroup(), "VCF");
assertEquals(sf.getBegin(), 4);