dummycommit

diff --git a/.classpath b/.classpath
index f87dd26..53b0aec 100644 (file)
--- a/.classpath
+++ b/.classpath
@@ -48,9 +48,8 @@
        <classpathentry kind="lib" path="lib/log4j-to-slf4j-2.0-rc2.jar"/>
        <classpathentry kind="lib" path="lib/slf4j-log4j12-1.7.7.jar"/>
        <classpathentry kind="lib" path="lib/VARNAv3-91.jar"/>
-
        <classpathentry kind="lib" path="lib/jfreesvg-2.1.jar"/>
-       <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/plugin.jar"/>
+       <classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/plugin"/>
        <classpathentry kind="lib" path="lib/xml-apis.jar"/>
        <classpathentry kind="con" path="org.eclipse.jdt.junit.JUNIT_CONTAINER/4"/>
        <classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER"/>

diff --git a/examples/applets.html b/examples/applets.html
index e48a6b5..f28367d 100755 (executable)
--- a/examples/applets.html
+++ b/examples/applets.html
@@ -167,7 +167,8 @@ var _gaq = _gaq || [];_gaq.push(["_setAccount", "UA-9060947-1"]);_gaq.push(["_tr
  Examples aren't working ?<br/>Try <a href="u_applets.html">the unsigned applet demos</a>
 </div>
 <div style="margin:8px; padding:10px; align: left;">
-<p>Quick Links to jars for example:<br/><a href="jalviewApplet.jar">jalviewApplet.jar</a> and <a href="JmolApplet-12.2.4.jar">JmolApplet.jar</a>
+<p>Quick Links to jars for example:<br/><a href="jalviewApplet.jar">jalviewApplet.jar</a>, <a href="JmolApplet-12.2.4.jar">JmolApplet.jar</a>,
+and <a href="VARNAv3-91.jar">VARNAv3-91.jar</a>
 </p></div>
 </div>
 </div>
@@ -189,7 +190,7 @@ Try out JalviewLite by pressing one of the buttons below.<br/>
       <td width="10%" valign="center">
        <applet
    code="jalview.bin.JalviewLite" width="140" height="35"
-   archive="jalviewApplet.jar">
+   archive="jalviewApplet.jar,VARNAv3-91.jar">
 <param name="permissions" value="sandbox"/>
 <param name="file" value="uniref50.fa"/>
 <param name="treeFile" value="ferredoxin.nw"/>
@@ -215,7 +216,7 @@ Try out JalviewLite by pressing one of the buttons below.<br/>
     <tr>
       <td width="10%" valign="center"><applet
    code="jalview.bin.JalviewLite" width="140" height="35"
-   archive="jalviewApplet.jar">
+   archive="jalviewApplet.jar,JmolApplet-12.2.4.jar,VARNAv3-91.jar">
 <param name="permissions" value="sandbox"/>
 <param name="file" value="uniref50.fa"/>
 <param name="features" value="exampleFeatures.txt"/>
@@ -240,7 +241,7 @@ Try out JalviewLite by pressing one of the buttons below.<br/>
     <tr>
       <td width="10%" valign="center"><applet
    code="jalview.bin.JalviewLite" width="140" height="35"
-   archive="jalviewApplet.jar,JmolApplet-12.2.4.jar">
+   archive="jalviewApplet.jar,JmolApplet-12.2.4.jar,VARNAv3-91.jar">
 <param name="permissions" value="sandbox"/>
 <param name="file" value="uniref50.fa"/>
 <param name="showFullId" value="false"/>
@@ -266,7 +267,7 @@ Try out JalviewLite by pressing one of the buttons below.<br/>
     <tr>
       <td width="10%" valign="center"><applet
    code="jalview.bin.JalviewLite" width="140" height="35"
-   archive="jalviewApplet.jar">
+   archive="jalviewApplet.jar,JmolApplet-12.2.4.jar,VARNAv3-91.jar">
 <param name="permissions" value="sandbox"/>
 <param name="file" value="jpred_msa.fasta"/>
 <param name="jnetfile" value="jpred_msa.seq.concise"/>
@@ -297,7 +298,7 @@ Try out JalviewLite by pressing one of the buttons below.<br/>
     <tr>
       <td width="10%" valign="center"><applet
    code="jalview.bin.JalviewLite" width="140" height="35"
-   archive="jalviewApplet.jar">
+   archive="jalviewApplet.jar,JmolApplet-12.2.4.jar,VARNAv3-91.jar">
 <param name="permissions" value="sandbox"/>
 <param name="file" value="RF00031_folded.stk"/>
 <param name="showFullId" value="false"/>