JAL-4160 JAL-4195 wait around until alignFrame calculators are finished before trying...
[jalview.git] / src / jalview / bin / argparser / Arg.java
2023-05-30 Ben SoaresJAL-629 JAL-4121 Added documentation to Help docs and...
2023-05-30 Ben SoaresJAL-629 Better formatting of Arg.Opt options in usage...
2023-05-27 Ben SoaresJAL-4121 Store Arg.Opts in bootstrapArgs. Change Opt...
2023-05-23 Ben SoaresJAL-629 Added --structureimage code and formatting...
2023-05-22 Ben SoaresJAL-629 --structureimage with formatting args.
2023-05-21 Ben SoaresJAL-629 Clarify sections of arguments with --help-all...
2023-05-20 Ben SoaresJAL-4187 JAL-629 JAL-3830 small adjustments after furth...
2023-05-20 Ben SoaresJAL-4187 JAL-629 JAL-3830 adjustments to Cygwin and...
2023-05-19 Ben SoaresJAL-629 Added Arg.Types and additional --help-type...
2023-05-18 Ben SoaresJAL-629 fixes to typed args
2023-05-18 Ben SoaresJAL-629 Added 'Type' to args and argvalues
2023-05-15 Ben SoaresRevert "JAL-629 Add a --threads argument to allow a...
2023-05-15 Ben SoaresJAL-629 Add a --threads argument to allow a limited...
2023-05-13 Ben SoaresJAL-629 launcher shell script uses jalview.bin.Launcher...
2023-05-12 Ben SoaresJAL-629 Added --opened arg which is like limiting ...
2023-05-11 Ben SoaresJAL-629 Add some shortnames to args. Add Opt.OUTPUT...
2023-05-11 Ben SoaresJAL-629 Fix --tempfac. Hide non-working --notempfac...
2023-05-11 Ben SoaresJAL-629 Added linkedId to ArgValuesMap for reference...
2023-05-10 Ben SoaresJAL-629 More docs. Usage statement. Adjust some logging...
2023-05-09 Ben SoaresJAL-629 Add --seqid for non-subval use, make arg value...
2023-05-09 Ben SoaresJAL-629 change --renderer to --textrenderer to be more...
2023-05-04 Ben SoaresJAL-629 More NG arguments: --features, --annotations...
2023-05-03 Ben SoaresJAL-629 added eps and imagemap. Added --output and...
2023-05-02 Ben SoaresJAL-629 Changed --newframe and --allframes to --new...
2023-05-02 Ben SoaresJAL-629 Add --renderer arg/subval for vector output...
2023-04-30 Ben SoaresJAL-629 Change behaviour of --open GLOB to increment...
2023-04-29 Ben SoaresJAL-629 Added --all arg, [*] linkedId and functionality...
2023-04-28 Ben SoaresJAL-629 Change colour scheme shortnames to something...
2023-04-27 Ben SoaresJAL-629 Changed --increment to --newframe to make sense...
2023-04-24 Ben SoaresJAL-629 Add --nowebdiscovery. Distinguish arg=="open...
2023-04-23 Ben SoaresJAL-629 Change --open to --append and --opennew to...
2023-04-22 Ben SoaresJAL-629 Test and fix --annotation --ssannotation args...
2023-04-04 Ben SoaresJAL-629 more info in usage statement
2023-04-04 Ben SoaresJAL-629 Start of Usage statement
2023-04-04 Ben SoaresJAL-629 More consistent printing of --arguments. Exampl...
2023-04-04 Ben SoaresJAL-629 --initsubstitutions as a bootstrap arg, new...
2023-04-03 Ben SoaresJAL-629 added setprop. More filename based substitution...
2023-03-29 Ben SoaresJAL-629 Added --opennew --nonews --nosplash. Added...
2023-03-28 Ben SoaresJAL-629 Opening files in new windows. not working yet
2023-03-25 Ben SoaresJAL-629 improvements to argparser toString. Improvement...
2023-03-24 Ben SoaresJAL-629 Test tidyup
2023-03-23 Ben SoaresJAL-629 refactor ArgParser and helper classes all to...