Merge branch 'develop' into feature/JAL-3416_update_to_flatlaf_3.1.1_with_unpacked_na...
[jalview.git] / src / jalview / bin / argparser / ArgParser.java
2023-05-23 Ben SoaresJAL-629 Added --structureimage code and formatting...
2023-05-18 Ben SoaresJAL-629 fixes to typed args
2023-05-18 Ben SoaresJAL-629 Added 'Type' to args and argvalues
2023-05-16 Ben SoaresJAL-629 Ensure precedence of named linked ID values...
2023-05-14 Ben SoaresJAL-629 add an {extension} substitution
2023-05-12 Ben SoaresJAL-629 Added --opened arg which is like limiting ...
2023-05-11 Ben SoaresJAL-629 Add some shortnames to args. Add Opt.OUTPUT...
2023-05-11 Ben SoaresJAL-629 Fix --tempfac. Hide non-working --notempfac...
2023-05-11 Ben SoaresJAL-629 Added linkedId to ArgValuesMap for reference...
2023-05-10 Ben SoaresJAL-629 Check Arg options for obtaining boolean or...
2023-05-10 Ben SoaresJAL-629 More docs. Usage statement. Adjust some logging...
2023-05-04 Ben SoaresJAL-629 More NG arguments: --features, --annotations...
2023-05-02 Ben SoaresJAL-629 Changed --newframe and --allframes to --new...
2023-05-02 Ben SoaresJAL-629 Add --renderer arg/subval for vector output...
2023-04-30 Ben SoaresJAL-629 Change behaviour of --open GLOB to increment...
2023-04-29 Ben SoaresJAL-629 Added --all arg, [*] linkedId and functionality...
2023-04-27 Ben SoaresJAL-629 Changed --increment to --newframe to make sense...
2023-04-27 Ben SoaresJAL-629 allow opening URL as only argument(s)
2023-04-24 Ben SoaresJAL-629 Add --nowebdiscovery. Distinguish arg=="open...
2023-04-23 Ben SoaresJAL-629 Change --open to --append and --opennew to...
2023-04-22 Ben SoaresJAL-629 Test and fix --annotation --ssannotation args...
2023-04-14 Ben SoaresJAL-629 Adding PAE and TFType at structure loading...
2023-04-12 Ben SoaresJAL-629 allow comments in argfiles '#'
2023-04-05 Ben SoaresJAL-629 Tests for FileUtils. Tidying counter substituti...
2023-04-04 Ben SoaresJAL-629 More consistent printing of --arguments. Exampl...
2023-04-04 Ben SoaresJAL-629 --initsubstitutions as a bootstrap arg, new...
2023-04-03 Ben SoaresJAL-629 added setprop. More filename based substitution...
2023-03-30 Ben SoaresJAL-629 fix bug for opening single named file with...
2023-03-30 Ben SoaresJAL-629 Don't use new ArgParser if there are no --args...
2023-03-30 Ben SoaresJAL-629 fix SubVals npe
2023-03-29 Ben SoaresJAL-629 Added --opennew --nonews --nosplash. Added...
2023-03-28 Ben SoaresJAL-629 Opening files in new windows. not working yet
2023-03-25 Ben SoaresJAL-629 open initial non-Arg arguments as files in...
2023-03-23 Ben SoaresJAL-629 refactor ArgParser and helper classes all to...