SwingJS transpiler to 3.2.5.v1 (fixed java.util.stream)
[jalview.git] / src / jalview / bin /
2019-08-28 hansonrJalviewJS2 optional headless, output
2019-08-28 hansonrJAL-3253-applet JAL-3423 Windows TestNG
2019-08-27 hansonrJAL-3253-applet JAL-3424 headless fix for Windows
2019-08-27 hansonrJAL-3253-applet JAL-3424 headless fix for Windows
2019-08-01 hansonrdebug comment out
2019-08-01 hansonrJAL-3253-applet JAL-3383 Overview speed up -- see Issue...
2019-07-31 hansonrJAL-3392 calculation workers notify Jalview
2019-07-29 hansonrJAL-3383 JAL-3253-applet removes unnecessary updateOver...
2019-07-29 hansonrJAL-3369 JAL-3253-applet adds JS app.showOverview()
2019-07-29 hansonrJAL-3387 no-annotation too early
2019-07-29 hansonrJAL-3379 Javascript applet.app
2019-07-29 hansonrJAL-3778 moving Java logging to Platform.
2019-07-24 hansonrJAL-3253-applet adds NOMENUBAR, NOSTATUS, NOCALCULATION...
2019-07-24 hansonrJAL-3374 "noannotation" and menu sync
2019-07-18 hansonrJAL-3269 ready for testing embedded interface
2019-07-18 hansonrJAL-3370 sep ignored in getAlignmentOrderFrom(AlignFram...
2019-07-18 hansonrJAL-3269 JAL-3370 JalviewJS interface upgrade
2019-07-12 hansonrJAL-3366 JAL-3253-applet
2019-05-19 hansonrJalview-JS/JAL-3253-applet JAL-3192 secondary core...
2019-05-19 hansonrJalview-JS/JAL-3253-applet adds AlignFrameI empty inter...
2019-05-18 hansonrJalview-JS/JAL-3253-applet adds shell JalviewJSApi...
2019-05-17 hansonrJalview-JS/JAL-3253-applet more argument parsing
2019-05-17 hansonrJalview-JS/JAL-3253-applet additional static final...
2019-05-17 hansonrJalview-JS/JAL-3253-applet additional static final...
2019-05-17 hansonrJalview-JS/JAL-3253-applet adding more applet parameter...
2019-05-16 hansonrJalview-JS/JAL-3253 applet param PDBFILE
2019-05-16 hansonrJalview-JS/JAL-3253 honor Applet param case insensitive
2019-05-16 hansonrJalview-JS/JAL-3253 applet param GROUPS
2019-05-16 hansonrJalview-JS/JAL-3253 applet params jpredfile, jnetfile
2019-05-16 hansonrJalview-JS/JAL-3253 debug comments out
2019-05-16 hansonrJalview-JS/JAL-3253 AppletParams color params
2019-05-15 gmungocJAL-3253-applet feature parameter processing fixed
2019-05-15 gmungocJAL-3253 ApplicationSingletonProvider replaces Instance
2019-05-15 hansonrJAL-3253-applet, reading applet tag parameters needed...
2019-05-14 hansonrFix to not create lasting static instance in JavaScript...
2019-05-13 hansonrJalviewAppLoader for moving code from JalviewLite relat...
2019-05-13 hansonrjalview.bin.AppletParams
2019-05-10 hansonrJAL-3253 jalview.bin.Instance for AppCache and FeatureA...
2019-05-10 hansonrJAL-3253 jalview.bin.Instance streamlining
2019-05-10 hansonrJAL-3253 jalview.bin.Instance handles all singleton...
2019-05-09 hansonrJAL-3253/JAL-3258 FileLoader fix for use of file.separator
2019-05-09 hansonrJAL-3253/JAL-3257
2019-05-09 hansonrJAL-3253 preliminary static fixes for JavaScript part...
2019-05-09 hansonrJAL-3253 preliminary static fixes for JavaScript part...
2019-05-08 hansonrJAL-3253 preliminary static fixes for JavaScript part 2
2019-05-08 hansonrJAL-3253 preliminary static fixes for JavaScript
2019-05-08 hansonrJAL-3253 AppletParams class for processing applet-speci...
2019-04-05 hansonrfixes for Jalview command-line URI code
2019-04-03 hansonrreplacing @j2sNative with @j2sIgnore where appropriate...
2019-04-03 hansonrj2sNative clean-up. Fixes problem with second try of...
2019-03-31 hansonrCache JS adds search of Info for jalview_xxx properties
2019-03-27 gmungocJAL-3032 small formatting and isJS() tidy
2019-03-27 hansonrreinstating test data for JalviewJS
2019-03-27 hansonrcomment out of @j2sNative block
2019-03-27 hansonrconsolidation of Platform isJS calls
2019-03-27 hansonrisJS cleanup
2019-03-13 gmungocMerge branch 'develop' into trialMerge
2019-03-11 gmungocMerge branch 'feature/JAL-3127_seqidChainshading' into...
2019-03-06 gmungocMerge branch 'tasks/JAL-3035_remove_dasobert_dependency...
2019-03-06 gmungocJAL-3035 more das bits removed
2019-03-06 Jim ProcterJAL-3208 re-enable the setprop CLI arg, but only in...
2019-03-04 gmungocMerge remote-tracking branch 'origin/tasks/JAL-3035_rem...
2019-02-28 gmungocJAL-3032 any url parameter not "j2s..." taken as Jalvie... Jalview-BH/JAL-3026-JAL-3063-JAXB
2019-02-25 gmungocJAL-3032 Jalview (as JS) parse query params to main...
2019-02-25 gmungocJAL-3032 JalviewJS2 converts url query parameters to...
2019-01-26 hansonrJalview.isJS() --> Platform.isJS(), DBRefEntry[] -...
2019-01-21 hansonrisAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA...
2019-01-18 hansonrcanvas line/font/pixel fixes; menu accelerators;
2019-01-11 hansonr(commented out but potentially useful) methods to tap...
2018-12-01 hansonradding jaxbtest.jvx and directing JalviewJS2.java to...
2018-11-11 hansonradds static declaration of AJAX-readable domains
2018-10-19 Ben SoaresJAL-3141 Backup files being created with default suffix...
2018-10-17 Jim ProcterMerge branch 'feature/JAL-3063JAXB' into Jalview-BH...
2018-10-09 Jim ProcterJAL-3127 pass reference to AlignViewportI when creating...
2018-09-18 Jim ProcterJAL-3035 more dedasification
2018-09-11 Jim ProcterMerge branch 'develop' into releases/Release_2_11_Branch
2018-09-05 Jim ProcterJAL-3065 - amended commit 4906697ab6e5a79fbce3baae89f7... bug/JAL-3065_DH_keyPair_Exception_nogroovysettings
2018-08-21 hansonrmc_view references were MCview
2018-07-23 gmungocJAL-3056 suppress menu options, and repoint Help, for...
2018-07-23 gmungocJAL-3048 javadoc and code tidy
2018-07-20 hansonrJAL-3032 moving Mungo's original JalviewJS.java out...
2018-07-17 bsoaresJAL-3065
2018-07-11 Jim ProcterJAL-3048 refactored export settings to bean+dialog... Jalview-BH/JAL-3048_exportSettingsrefactor
2018-06-27 hansonrJAL-3032 just the changes pulled already
2018-06-26 Jim ProcterMerge branch 'tasks/JAL-3035_remove_dasobert_dependency...
2018-06-26 Jim ProcterJAL-3035 - jalview-das is no more !
2018-06-24 hansonrJAL-3032
2018-06-23 hansonrRELATIVE_URL
2018-06-23 hansonrMerge branch 'Jalview-BH/JAL-3026' of https://source...
2018-06-23 hansonrJAL-3026 JDesktop/JInternalFrames support + relative...
2018-06-22 gmungocMerge branch 'Jalview-BH/JAL-3026' of https://source...
2018-06-22 gmungocJAL-3030 size split frame taller
2018-06-22 hansonrfix for no access-control-origin on jalview site
2018-06-21 gmungocJAL-3030 allow uncaught exceptions (for easier JS debuggin)
2018-06-21 gmungocJAL-3030 try to open a split frame if file and file2...
2018-06-20 hansonrupdate of javajs package; adds org.apache.harmony,...
2018-06-20 hansonrBob first commit JAL-3032
2018-06-20 gmungocJAL-3030 suppress change that goes with JAL-3031
2018-06-20 gmungocJAL-3030 reads features file, properties file
2018-06-19 gmungocJAL-3030 added menu bar
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